ncRNA ID | novel_zma_miR10230 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr9:150352872-150353001 [+] |
Reference genome | RefGen_v4 |
Source | SRR5099742 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUACAUCCCCUCACAUCCACC - 21 |
Stem-loop(if miRNA) |
--     U             C   C   U        U     ---G    AAAA   -AUU   A   UUACA CCCCUCACAUCCA CAC UGG GGUCCAUA AAAUA    AAGA    CAA    ACU G   ||||| ||||||||||||| ||| ||| |||||||| |||||    ||||    |||    |||   AAUGU GGGGAGUGUAGGU GUG ACU CCGGGUGU UUUGU    UUUU    GUU    UGG A GA     C             A   A   U        U     AUAA    AAAC   GAAU   A |
Stem-loop sequence | UUACAUCCCCUCACAUCCACCACCUGGUGGUCCAUAUAAAUAGAAGAAAAACAAAUUACUAGAAGGUUAAGUUGCAAAUUUUAAUAUGUUUUUGUGGGCCUUCAAGUGAUGGAUGUGAGGGGCUGUAAAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008654724.2 |
|
1.5 | PREDICTED: Zea mays flowering time control protein FPA (LOC103633041), transcript variant X3, mRNA | NA | coding protein | psRNATarget |