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BaseInfo

ncRNA ID	osa-miRf10620-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - CGAUGCCGUAGUCCAUGAGC - NA
Stem-loop(if miRNA)	GG    - UC       -          ACAC  -C  AC GC  UGGU G  CAUGGAC GCGGCGUCGA    GC  GC  C ||  |||| |  ||||||| ||||||||||    ||  ||  G CG  GCCG C  GUACCUG UGCCGUAGCU    CG  CG  U   UU    G GA       A          ---C  CU  CU
Stem-loop sequence	GCGGUGGUGUCCAUGGACGCGGCGUCGAACACGCCGCACCGUUCGCUCGCCUCGAUGCCGUAGUCCAUGAGCGGCCGUUGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
CT834450.1	ncRNA:20   CGAGUACCUGAUGCCGUAGC   1   |||||||||||||||||||| targets:553   GCUCAUGGACUACGGCAUCG   572 Target Full Sequence	0.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI029E16, full insert sequence	NA	coding protein	psRNATarget
CT832229.1	ncRNA:20   CGAGUACCUGAUGCCGUAGC   1   |||||||||||||||||||| targets:576   GCUCAUGGACUACGGCAUCG   595 Target Full Sequence	0.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI016O09, full insert sequence	NA	coding protein	psRNATarget
XM_015779725.1	ncRNA:20   CGAGUACCUGAUGCCGUAGC   1   |||||||||||||||||||| targets:578   GCUCAUGGACUACGGCAUCG   597 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group protein GDAP2 homolog (LOC4336656), mRNA	protein GDAP2 homolog(LOC4336656)	coding protein	psRNATarget
AK107862.1	ncRNA:20   CGAGUACCUGAUGCCGUAGC   1   |||||||||||||||||||| targets:580   GCUCAUGGACUACGGCAUCG   599 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:002-134-B10, full insert sequence	NA	coding protein	psRNATarget
AK071867.1	ncRNA:20   CGAGUACCUGAUGCCGUAGC   1   |||||||||||||||||||| targets:584   GCUCAUGGACUACGGCAUCG   603 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:J023117I15, full insert sequence	NA	coding protein	psRNATarget
CT832230.1	ncRNA:20   CGAGUACCUGAUGCCGUAGC   1   |||||||||||||||||||| targets:611   GCUCAUGGACUACGGCAUCG   630 Target Full Sequence	0.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI219J18, full insert sequence	NA	coding protein	psRNATarget
XM_015767933.1	ncRNA:20   CGAGUACCUGAUGCCGUAGC   1   |||||||||||||||||||| targets:618   GCUCAUGGACUACGGCAUCG   637 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group ganglioside-induced differentiation-associated protein 2 (LOC4330263), mRNA	ganglioside-induced differentiation-associated protein 2(LOC4330263)	coding protein	psRNATarget
AK060958.1	ncRNA:20   CGAGUACCUGAUGCCGUAGC   1   |||||||||||||||||||| targets:744   GCUCAUGGACUACGGCAUCG   763 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:006-201-H07, full insert sequence	NA	coding protein	psRNATarget
XM_015792880.1	ncRNA:20   CGAGUACCUGAUGCCGUAGC   1   |||||||||*|||||||||* targets:322   GCUCAUGGAGUACGGCAUCA   341 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4345003 (LOC4345003), transcript variant X1, mRNA	uncharacterized LOC4345003(LOC4345003)	coding protein	psRNATarget
AK100248.1	ncRNA:20   CGAGUACCUGAUGCCGUAGC   1   |||||||||*|||||||||* targets:145   GCUCAUGGAGUACGGCAUCA   164 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023059K19, full insert sequence	NA	coding protein	psRNATarget
CT831089.1	ncRNA:20   CGAGUACCUGAUGCCGUAGC   1   ||||||||||||||*||||* targets:1813   GCUCAUGGACUACGCCAUCU   1832 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA243I20, full insert sequence	NA	coding protein	psRNATarget
AK101193.1	ncRNA:20   CGAGUACCUGAUGCCGUAGC   1   ||||||||||||||*||||* targets:1815   GCUCAUGGACUACGCCAUCU   1834 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J033030I03, full insert sequence	NA	coding protein	psRNATarget
XM_015792311.1	ncRNA:20   CGAGUACCUGAUGCCGUAGC   1   ||||||||||||||*||||* targets:1864   GCUCAUGGACUACGCCAUCU   1883 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group probable indole-3-acetic acid-amido synthetase GH3.8 (LOC4343785), mRNA	probable indole-3-acetic acid-amido synthetase GH3.8(LOC4343785)	coding protein	psRNATarget
XM_015792881.1	ncRNA:20   CGAGUACCUGAUGCCGUAGC   1   |||||||||*|||||||||* targets:327   GCUCAUGGAGUACGGCAUCA   346 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4345003 (LOC4345003), transcript variant X2, mRNA	uncharacterized LOC4345003(LOC4345003)	coding protein	psRNATarget