ncRNA ID | novel_zma_miR10226 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr8:106644059-106644133 [+] |
Reference genome | RefGen_v4 |
Source | SRR5099742;SRR5100248 |
Length | 24 |
Mature sequence(if miRNA) | 52 - UGUAUGAACUUGUGAGCCUGAGGU - 75 |
Stem-loop(if miRNA) |
--       -   C  AG    A  CC  A  CC  UAU   UUCGGGC CGC GG  CGUA CA  CU CU  AC   G   ||||||| ||| ||  |||| ||  || ||  ||   GAGUCCG GUG UC  GUAU GU  GA GA  UG   U UG       A   U  AA    -  UC  -  UA  UAG |
Stem-loop sequence | UUCGGGCCGCCGGAGCGUAACACCCUACUCCACUAUGUGAUGUAUAGAGCUUGUAUGAACUUGUGAGCCUGAGGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020545234.1 |
|
1.5 | PREDICTED: Zea mays ABC transporter I family member 1-like (LOC103642079), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
EU961461.1 |
|
2.0 | Zea mays clone 235705 hypothetical protein mRNA, complete cds | NA | coding protein | psRNATarget |