ncRNA ID | novel_zma_miR10223 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr8:98980953-98981034 [+] |
Reference genome | RefGen_v4 |
Source | SRR5099742 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUUGAGUUAUCUGGUGCACAUGCA - 24 |
Stem-loop(if miRNA) |
--A         CU   G         AGCC    GAG   U    UUGAGUUAU  GGU CACAUGCAU    GUCU   GUC U    |||||||||  ||| |||||||||    ||||   ||| U    GAUUCAAUA  CCG GUGUACGUG    CAGG   CAG G GGA         AC   G         --GA    -AA   G |
Stem-loop sequence | AUUGAGUUAUCUGGUGCACAUGCAUAGCCGUCUGAGGUCUUUGGGACAAGGACAGGUGCAUGUGGGCCCAAUAACUUAGAGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ109992.1 |
|
1.5 | TSA: Zea mays contig45652, mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EZ087213.1 |
|
2.5 | TSA: Zea mays contig22859, mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EZ058335.1 |
|
2.5 | TSA: Zea mays contig59457, mRNA sequence | NA | coding protein | psRNATarget | |||||||||
BT067946.2 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFb0003M08 mRNA, complete cds | NA | coding protein | psRNATarget |