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BaseInfo

ncRNA ID novel_zma_miR10223
Species Zea mays
Class miRNA
Genome position Chr8:98980953-98981034 [+]
Reference genome RefGen_v4
Source SRR5099742
Length 24
Mature sequence(if miRNA) 1 - AUUGAGUUAUCUGGUGCACAUGCA - 24
Stem-loop(if miRNA) --A         CU   G         AGCC    GAG   U
   UUGAGUUAU  GGU CACAUGCAU    GUCU   GUC U
   |||||||||  ||| |||||||||    ||||   ||| U
   GAUUCAAUA  CCG GUGUACGUG    CAGG   CAG G
GGA         AC   G         --GA    -AA   G
Stem-loop sequence AUUGAGUUAUCUGGUGCACAUGCAUAGCCGUCUGAGGUCUUUGGGACAAGGACAGGUGCAUGUGGGCCCAAUAACUUAGAGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ109992.1
ncRNA:24   ACGUACACGUGGUCUAUUGAGUUA   1
  ||||||||||||||||||||=|||
targets:479   UGCAUGUGCACCAGAUAACUUAAU   502

1.5 TSA: Zea mays contig45652, mRNA sequence NA coding protein psRNATarget
EZ087213.1
ncRNA:24   ACGUACACGUGGUCUAUUGAGUUA   1
  ||||||||||||||||||||=||*
targets:48   UGCAUGUGCACCAGAUAACUUAAC   71

2.5 TSA: Zea mays contig22859, mRNA sequence NA coding protein psRNATarget
EZ058335.1
ncRNA:24   ACGUACACGUGGUCUAUUGAGUUA   1
  ||||||||||||||||||||=||*
targets:487   UGCAUGUGCACCAGAUAACUUAAC   510

2.5 TSA: Zea mays contig59457, mRNA sequence NA coding protein psRNATarget
BT067946.2
ncRNA:24   ACGUACACGUGGUCUAUUGAGUUA   1
  ||||||||||||||||||||=||*
targets:460   UGCAUGUGCACCAGAUAACUUAAC   483

2.5 Zea mays full-length cDNA clone ZM_BFb0003M08 mRNA, complete cds NA coding protein psRNATarget