ncRNA ID | novel_zma_miR10216 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:202619650-202619759 [+] |
Reference genome | RefGen_v4 |
Source | SRR5099742;SRR5100248;SRR5100255 |
Length | 21 |
Mature sequence(if miRNA) | 90 - UGUAGGAAACGGAUGACGCCU - 110 |
Stem-loop(if miRNA) |
-GUAUC     -C     C   AAA     ---    CU   A  ---GG      UA       CAUCC  UUCCU UAA   GUGUC   GGCU  UUU GC     UGAAGC  A       |||||  ||||| |||   |||||   ||||  ||| ||     ||||||       GUAGG  AAGGA GUU   CAUAG   CCGG  AAA CG     ACUUUG  A UCCGCA     CA     U   AAC     UCU    CC   C  AGUAA      CG |
Stem-loop sequence | GUAUCCAUCCCUUCCUCUAAAAAGUGUCGGCUCUUUUAGCGGUGAAGCUAAAGCGUUUCAAAUGAGCCAAACCGGCCUCUGAUACCAAUUGUAGGAAACGGAUGACGCCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT016820.1 |
|
1.5 | Zea mays clone Contig653 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EU943181.1 |
|
1.5 | Zea mays clone 1580698 mRNA sequence | NA | coding protein | psRNATarget |