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BaseInfo

ncRNA ID	novel_zma_miR10201
Species	Zea mays
Class	miRNA
Genome position	Chr8:116655004-116655061 [-]
Reference genome	RefGen_v4
Source	SRR5099742
Length	22
Mature sequence(if miRNA)	1 - UAGAGAAUCGUUUAGAGAAACU - 22
Stem-loop(if miRNA)	--    A      C    A    AAG  GU   UUUU CUAAAC GGUU UUUA   UA  C   |||| |||||| |||| ||||   ||   AAAG GAUUUG CUAA AGAU   GU  A UC    A      -    G    -AA  AA
Stem-loop sequence	UUUUACUAAACCGGUUAUUUAAAGUAGUCAAAUGAAUAGAGAAUCGUUUAGAGAAACU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ238111.1	ncRNA:22   UCAAAGAGAUUUGCUAAGAGAU   1   ||||||||||||||=||||||| targets:75   AGUUUCUCUAAACGGUUCUCUA   96 Target Full Sequence	1.5	Sequence 4106 from Patent EP2985353	NA	coding protein	psRNATarget
JB166442.1	ncRNA:22   UCAAAGAGAUUUGCUAAGAGAU   1   ||||||||||||||=||||||| targets:75   AGUUUCUCUAAACGGUUCUCUA   96 Target Full Sequence	1.5	Sequence 4106 from Patent EP2559767	NA	coding protein	psRNATarget
HI405981.1	ncRNA:22   UCAAAGAGAUUUGCUAAGAGAU   1   ||||||||||||||=||||||| targets:75   AGUUUCUCUAAACGGUUCUCUA   96 Target Full Sequence	1.5	Sequence 4106 from Patent EP2074227	NA	coding protein	psRNATarget
EU977130.1	ncRNA:22   UCAAAGAGAUUUGCUAAGAGAU   1   ||||||||||||||=||||||| targets:878   AGUUUCUCUAAACGGUUCUCUA   899 Target Full Sequence	1.5	Zea mays clone 999810 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EU977130.1	ncRNA:22   UCAAAGAGAUUUGCUAAGAGAU   1   |**|||||||||||=||||||| targets:821   ACGUUCUCUAAACGGUUCUCUA   842 Target Full Sequence	1.5	Zea mays clone 999810 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001152204.1	ncRNA:22   UCAAAGAGAUUUGCUAAGAGAU   1   ||||||||||||||=||||||| targets:878   AGUUUCUCUAAACGGUUCUCUA   899 Target Full Sequence	1.5	Zea mays uncharacterized LOC100279180 (LOC100279180), mRNA	NA	coding protein	psRNATarget
NM_001152204.1	ncRNA:22   UCAAAGAGAUUUGCUAAGAGAU   1   |**|||||||||||=||||||| targets:821   ACGUUCUCUAAACGGUUCUCUA   842 Target Full Sequence	1.5	Zea mays uncharacterized LOC100279180 (LOC100279180), mRNA	NA	coding protein	psRNATarget
EU945316.1	ncRNA:22   UCAAAGAGAUUUGCUAAGAGAU   1   ||||||||||||||=||||||| targets:1381   AGUUUCUCUAAACGGUUCUCUA   1402 Target Full Sequence	1.5	Zea mays clone 257973 mRNA sequence	NA	coding protein	psRNATarget