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BaseInfo

ncRNA ID novel_zma_miR10197
Species Zea mays
Class miRNA
Genome position Chr8:133284634-133284688 [-]
Reference genome RefGen_v4
Source SRR5099742
Length 24
Mature sequence(if miRNA) 1 - UACCGAGAGUAGAACUUUGCCGAG - 24
Stem-loop(if miRNA) ----CG     C          CA    C
      AGAGU CUGCUCUCGG  AACG G
      ||||| ||||||||||  ||||
      UUUCA GAUGAGAGCC  UUGU A
GAGCCG     A          -A    U
Stem-loop sequence CGAGAGUCCUGCUCUCGGCAAACGCGAUUGUUACCGAGAGUAGAACUUUGCCGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ241867.1
ncRNA:24   GAGCCGUUUCAAGAUGAGAGCCAU   1
  |||||||*|||*||||||||||||
targets:2   CUCGGCAUAGUCCUACUCUCGGUA   25

2.5 Sequence 7862 from Patent EP2985353 NA coding protein psRNATarget
JB170198.1
ncRNA:24   GAGCCGUUUCAAGAUGAGAGCCAU   1
  |||||||*|||*||||||||||||
targets:2   CUCGGCAUAGUCCUACUCUCGGUA   25

2.5 Sequence 7862 from Patent EP2559767 NA coding protein psRNATarget
HI409737.1
ncRNA:24   GAGCCGUUUCAAGAUGAGAGCCAU   1
  |||||||*|||*||||||||||||
targets:2   CUCGGCAUAGUCCUACUCUCGGUA   25

2.5 Sequence 7862 from Patent EP2074227 NA coding protein psRNATarget