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BaseInfo

ncRNA ID osa-miRf10616-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - CAUGAUACCUGAUAGGUAUCAC - NA
Stem-loop(if miRNA)     CA         A          C    A CU A  A     A
AUCG  UGAUAUCUG UAGGUAUCAU UGAU C  C CA GUAUC C
||||  ||||||||| |||||||||| |||| |  | || |||||
UAGU  ACUAUGGAU GUCCAUAGUA GCUA G  G GU CAUAG C
    CC         A          C    A AU -  G     U
Stem-loop sequence AUCGCAUGAUAUCUGAUAGGUAUCAUCUGAUACCUCACAAGUAUCACCUGAUACGUGGUAGAAUCGCAUGAUACCUGAUAGGUAUCACCUGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI403788.1
ncRNA:22   CACUAUGGAUAGUCCAUAGUAC   1
  ||||||||||||||||||||||
targets:36   GUGAUACCUAUCAGGUAUCAUG   57

0.0 Sequence 1913 from Patent EP2074227 NA coding protein psRNATarget
JB164249.1
ncRNA:22   CACUAUGGAUAGUCCAUAGUAC   1
  ||||||||||||||||||||||
targets:36   GUGAUACCUAUCAGGUAUCAUG   57

0.0 Sequence 1913 from Patent EP2559767 NA coding protein psRNATarget
LQ235918.1
ncRNA:22   CACUAUGGAUAGUCCAUAGUAC   1
  ||||||||||||||||||||||
targets:36   GUGAUACCUAUCAGGUAUCAUG   57

0.0 Sequence 1913 from Patent EP2985353 NA coding protein psRNATarget
XM_015770784.1
ncRNA:22   CACUAUGGAUAGUCCAUAGUAC   1
  *|||||=||||||||||||||*
targets:2073   AUGAUAUCUAUCAGGUAUCAUA   2094

2.0 PREDICTED: Oryza sativa Japonica Group glycerol-3-phosphate 2-O-acyltransferase 6 (LOC4328061), mRNA glycerol-3-phosphate 2-O-acyltransferase 6(LOC4328061) coding protein psRNATarget