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BaseInfo

ncRNA ID novel_zma_miR10186
Species Zea mays
Class miRNA
Genome position Chr8:169799533-169799702 [+]
Reference genome RefGen_v4
Source SRR5099742
Length 21
Mature sequence(if miRNA) 1 - UCCCUUUGUCGAGUGCCUUGG - 21
Stem-loop(if miRNA) --  C             CU    AACA              U  CUUU   -  UUC  A   --UU  U              CAU
  UC CUUUGUCGAGUGC  UGGC    GCACUCGGCAAAGA GG    GCC GG   CC GGU    CC UCUUUGCCGAGUGU   G
  || |||||||||||||  ||||    |||||||||||||| ||    ||| ||   || |||    || ||||||||||||||
  AG GAAACGGCUCACG  ACUG    CGUGAGCCGUUUCU CC    UGG CC   GG CCA    GG AGAAACGGCUCACG   G
CC  U             AU    GAAC              U  --UU   A  CUU  -   UUUC  U              ACU
Stem-loop sequence UCCCUUUGUCGAGUGCCUUGGCAACAGCACUCGGCAAAGAUGGCUUUGCCGGUUCCCAGGUUUCCUUCUUUGCCGAGUGUCAUGGUCAGCACUCGGCAAAGAUGGCUUUACCGGUUCCCAGGUUUCCUUCUUUGCCGAGUGCCAAGGUCAUAGCACUCGGCAAAGUGACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU974820.1
ncRNA:21   GGUUCCGUGAGCUGUUUCCCU   1
  =||||||=||||||||=||||
targets:455   UCAAGGCGCUCGACAAGGGGA   475

2.5 Zea mays clone 459108 hypothetical protein mRNA, complete cds NA coding protein psRNATarget