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BaseInfo

ncRNA ID novel_zma_miR10180
Species Zea mays
Class miRNA
Genome position Chr8:141311977-141312052 [+]
Reference genome RefGen_v4
Source SRR5099742;SRR5100248
Length 22
Mature sequence(if miRNA) 1 - UUCUUUUGCUUCUGGAUGGUAA - 22
Stem-loop(if miRNA) UUC       ---    - A  GU    -U   A   -  U
   UUUUGCU   UCUG G UG  AACA  GGC CAU CC G
   |||||||   |||| | ||  ||||  ||| ||| ||
   AAGACGA   AGAC C AC  UUGU  CCG GUA GG G
-AA       AUA    A C  UC    UU   -   U  U
Stem-loop sequence UUCUUUUGCUUCUGGAUGGUAACAUGGCACAUCCUGGUGGUAUGGCCUUUGUUCUCACCACAGAAUAAGCAGAAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ064344.1
ncRNA:22   AAUGGUAGGUCUUCGUUUUCUU   1
  ***||*|||||||||=||||||
targets:125   CCUCCCUCCAGAAGCGAAAGAA   146

2.5 TSA: Zea mays contig65468, mRNA sequence NA coding protein psRNATarget