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BaseInfo

ncRNA ID	novel_zma_miR10172
Species	Zea mays
Class	miRNA
Genome position	Chr7:62920350-62920415 [+]
Reference genome	RefGen_v4
Source	SRR5099742;SRR5100255
Length	22
Mature sequence(if miRNA)	45 - CCAAUCCCCUUCAACCCCGAAG - 66
Stem-loop(if miRNA)	--     A    C A      AG U      GA   UCGGG UUGA G GGAUUG  G GGAAAU  A   ||||| |||| | ||||||  | ||||||   AGCCC AACU C CCUAAC  C CCUUUA  C GA     C    U C      CU U      AU
Stem-loop sequence	UCGGGAUUGACGAGGAUUGAGGUGGAAAUGAACUAAUUUCCUCUCCAAUCCCCUUCAACCCCGAAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU941872.1	ncRNA:22   GAAGCCCCAACUUCCCCUAACC   1   |||||||*|||||||||||||| targets:55   CUUCGGGAUUGAAGGGGAUUGG   76 Target Full Sequence	1.0	Zea mays clone 1471472 mRNA sequence	NA	coding protein	psRNATarget
XM_020546797.1	ncRNA:22   GAAGCCCCAACUUCCCCUAACC   1   |||*|||*|||||||||||||| targets:5166   CUUGGGGAUUGAAGGGGAUUGG   5187 Target Full Sequence	2.0	PREDICTED: Zea mays protein TIFY 11d (LOC103643602), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008666766.2	ncRNA:22   GAAGCCCCAACUUCCCCUAACC   1   |||*|||*|||||||||||||| targets:5300   CUUGGGGAUUGAAGGGGAUUGG   5321 Target Full Sequence	2.0	PREDICTED: Zea mays protein TIFY 11d (LOC103643602), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU948932.1	ncRNA:22   GAAGCCCCAACUUCCCCUAACC   1   ****|||*|||||||||||||| targets:445   GGAAGGGAUUGAAGGGGAUUGG   466 Target Full Sequence	2.0	Zea mays clone 390623 mRNA sequence	NA	coding protein	psRNATarget
EU974318.1	ncRNA:22   GAAGCCCCAACUUCCCCUAACC   1   ****|||*|||||||||||||| targets:804   GGAAGGGAUUGAAGGGGAUUGG   825 Target Full Sequence	2.0	Zea mays clone 446002 mRNA sequence	NA	coding protein	psRNATarget
XM_008650655.1	ncRNA:22   GAAGCCCCAACUUCCCCUAACC   1   ****|||*|||||||||||||| targets:831   GGAAGGGAUUGAAGGGGAUUGG   852 Target Full Sequence	2.0	PREDICTED: Zea mays hypothetical protein (LOC103629579), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008650656.2	ncRNA:22   GAAGCCCCAACUUCCCCUAACC   1   ****|||*|||||||||||||| targets:916   GGAAGGGAUUGAAGGGGAUUGG   937 Target Full Sequence	2.0	PREDICTED: Zea mays hypothetical protein (LOC103629579), transcript variant X2, mRNA	NA	coding protein	psRNATarget