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BaseInfo

ncRNA ID	novel_zma_miR10165
Species	Zea mays
Class	miRNA
Genome position	Chr7:14495118-14495195 [-]
Reference genome	RefGen_v4
Source	SRR5099742
Length	24
Mature sequence(if miRNA)	55 - GUGGAUAGGCCCCACCUGCAGGUC - 78
Stem-loop(if miRNA)	--GU       C             CCACCAG     GU     GGAUAGG CCCACCUGCAGGU       AUAAC  U     ||||||| |||||||||||||       |||||     CCUAUCC GGGUGGGCGUCUA       UGUUG  U UCCU       A             UUUAUUA     AU
Stem-loop sequence	GUGGAUAGGCCCCACCUGCAGGUCCACCAGAUAACGUUUUAGUUGUAUUAUUUAUCUGCGGGUGGGACCUAUCCUCCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ073016.1	ncRNA:24   CUGGACGUCCACCCCGGAUAGGUG   1   |||||||||||||||||||||||| targets:17   GACCUGCAGGUGGGGCCUAUCCAC   40 Target Full Sequence	0.0	TSA: Zea mays contig08653, mRNA sequence	NA	coding protein	psRNATarget
JB163804.1	ncRNA:24   CUGGACGUCCACCCCGGAUAGGUG   1   |=|||*||||||||||||||||*| targets:87   GGCCUACAGGUGGGGCCUAUCCUC   110 Target Full Sequence	2.5	Sequence 1468 from Patent EP2559767	NA	coding protein	psRNATarget
JB163804.1	ncRNA:24   CUGGACGUCCACCCCGGAUAGGUG   1   |=|||*||||||||||||||||*| targets:141   GGCCUACAGGUGGGGCCUAUCCUC   164 Target Full Sequence	2.5	Sequence 1468 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235473.1	ncRNA:24   CUGGACGUCCACCCCGGAUAGGUG   1   |=|||*||||||||||||||||*| targets:87   GGCCUACAGGUGGGGCCUAUCCUC   110 Target Full Sequence	2.5	Sequence 1468 from Patent EP2985353	NA	coding protein	psRNATarget
LQ235473.1	ncRNA:24   CUGGACGUCCACCCCGGAUAGGUG   1   |=|||*||||||||||||||||*| targets:141   GGCCUACAGGUGGGGCCUAUCCUC   164 Target Full Sequence	2.5	Sequence 1468 from Patent EP2985353	NA	coding protein	psRNATarget
HI403343.1	ncRNA:24   CUGGACGUCCACCCCGGAUAGGUG   1   |=|||*||||||||||||||||*| targets:87   GGCCUACAGGUGGGGCCUAUCCUC   110 Target Full Sequence	2.5	Sequence 1468 from Patent EP2074227	NA	coding protein	psRNATarget
HI403343.1	ncRNA:24   CUGGACGUCCACCCCGGAUAGGUG   1   |=|||*||||||||||||||||*| targets:141   GGCCUACAGGUGGGGCCUAUCCUC   164 Target Full Sequence	2.5	Sequence 1468 from Patent EP2074227	NA	coding protein	psRNATarget
EZ055203.1	ncRNA:24   CUGGACGUCCACCCCGGAUAGGUG   1   |||-|||*|*|||||||||||||* targets:118   GAC-UGCUGCUGGGGCCUAUCCAG   140 Target Full Sequence	3.0	TSA: Zea mays contig56325, mRNA sequence	NA	coding protein	psRNATarget
AY623894.1	ncRNA:24   CUGGACGUCCACCCCGGAUAGGUG   1   |||-|||*|*|||||||||||||* targets:1142   GAC-UGCUGCUGGGGCCUAUCCAG   1164 Target Full Sequence	3.0	Zea mays putative pyruvate kinase mRNA, complete cds	NA	coding protein	psRNATarget