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BaseInfo

ncRNA ID	novel_zma_miR10159
Species	Zea mays
Class	miRNA
Genome position	Chr7:36683399-36683549 [-]
Reference genome	RefGen_v4
Source	SRR5099742
Length	25
Mature sequence(if miRNA)	127 - UUCCAUGCUCUACUCUGGUCCGAGA - 151
Stem-loop(if miRNA)	--    A         C                   --  -    AUA                  UAA     -   CU   UUCC UGCUCUACU UGGUCCGAGACAGAGUUUC  CA CACC   UCCUUGUUGUUCUCCGGA   UACAC UCU  C   |||| ||||||||| |||||||||||||||||||  || ||||   ||||||||||||||||||   ||||| |||  A   AAGG ACGAGAUGA GCUAGGUUCUGUCUCAAAG  GU GUGG   AGGGACGACAAGAGGUCU   AUGUG AGG  A CA    G         A                   CC  C    ---                  ---     C   AC
Stem-loop sequence	UUCCAUGCUCUACUCUGGUCCGAGACAGAGUUUCCACACCAUAUCCUUGUUGUUCUCCGGAUAAUACACUCUCUCAACAGGACGUGUAUCUGGAGAACAGCAGGGAGGUGCUGCCGAAACUCUGUCUUGGAUCGAAGUAGAGCAGGGAAAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008672589.2	ncRNA:25   AGAGC--CUGGUCUCAUCUCGUACCUU   1   *||=|--|||||||||=|||||||||= targets:1387   ACUUGACGACCAGAGUGGAGCAUGGAG   1413 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103648084 (LOC103648084), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020548683.1	ncRNA:25   AGAGC--CUGGUCUCAUCUCGUACCUU   1   *||=|--|||||||||=|||||||||= targets:1448   ACUUGACGACCAGAGUGGAGCAUGGAG   1474 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103648084 (LOC103648084), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008672590.2	ncRNA:25   AGAGC--CUGGUCUCAUCUCGUACCUU   1   *||=|--|||||||||=|||||||||= targets:1377   ACUUGACGACCAGAGUGGAGCAUGGAG   1403 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103648085 (LOC103648085), transcript variant X1, mRNA	NA	coding protein	psRNATarget