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BaseInfo

ncRNA ID novel_zma_miR10158
Species Zea mays
Class miRNA
Genome position Chr7:40534499-40534612 [-]
Reference genome RefGen_v4
Source SRR5099742
Length 24
Mature sequence(if miRNA) 91 - AGCCGUCGGAGAUAACAUUAUGUC - 114
Stem-loop(if miRNA) --                A       C        UUC  C                G
  AGCCGUCGGAGAUAAC UUAUGUC GACGGUCC   UG CAGUCGUCGGACGUAG A
  |||||||||||||||| ||||||| ||||||||   || ||||||||||||||||
  UCGGCAGCCUCUAUUG AAUAUAG CUGCCGGG   AC GUCGGCAGUCUGUAUU U
CG                C       A        --U  C                A
Stem-loop sequence AGCCGUCGGAGAUAACAUUAUGUCCGACGGUCCUUCUGCCAGUCGUCGGACGUAGGAUAUUAUGUCUGACGGCUGCCAUGGGCCGUCAGAUAUAACGUUAUCUCCGACGGCUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008671903.2
ncRNA:24   CUGUAUUACAAUAGAGGCUGCCGA   1
  |=||*|=**|||||||||||||||
targets:1435   GGCAAAGACUUAUCUCCGACGGCU   1458

3.0 PREDICTED: Zea mays flavonoid 3'-monooxygenase (LOC103647360), mRNA NA coding protein psRNATarget