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BaseInfo

ncRNA ID novel_zma_miR10155
Species Zea mays
Class miRNA
Genome position Chr7:27648022-27648131 [+]
Reference genome RefGen_v4
Source SRR5099742
Length 21
Mature sequence(if miRNA) 90 - CGCCGCUCGCACGCCCGAGAG - 110
Stem-loop(if miRNA) --     A    -  ----U     --  CGUUCCUGGUGGAGCGCCGCCGUCGGUCGC
  CUCGG GUGU CG     UGUCG  CU                              C
  ||||| |||| ||     |||||  ||
  GAGCC CGCA GC     GCGAC  GG                              U
GA     -    C  UCGCC     UA  ACCCCCGGUUGUCGCCACAGUAGAGCUCCG
Stem-loop sequence CUCGGAGUGUCGUUGUCGCUCGUUCCUGGUGGAGCGCCGCCGUCGGUCGCCUGCCUCGAGAUGACACCGCUGUUGGCCCCCAGGAUCAGCGCCGCUCGCACGCCCGAGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020544200.1
ncRNA:21   GAGAGCCCGCACGCUCGCCGC   1
  =*||||||||||||||||*||
targets:689   UCCUCGGGCGUGCGAGCGACG   709

1.5 PREDICTED: Zea mays uncharacterized LOC109942302 (LOC109942302), mRNA NA coding protein psRNATarget
EU948271.1
ncRNA:21   GAGAGCCCGCACGCUCGCCGC   1
  =*||||*||||||*|||||||
targets:194   UCCUCGAGCGUGCAAGCGGCG   214

2.5 Zea mays clone 372147 mRNA sequence NA coding protein psRNATarget