ncRNA ID | novel_zma_miR10155 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr7:27648022-27648131 [+] |
Reference genome | RefGen_v4 |
Source | SRR5099742 |
Length | 21 |
Mature sequence(if miRNA) | 90 - CGCCGCUCGCACGCCCGAGAG - 110 |
Stem-loop(if miRNA) |
--     A    -  ----U     --  CGUUCCUGGUGGAGCGCCGCCGUCGGUCGC   CUCGG GUGU CG     UGUCG  CU                              C   ||||| |||| ||     |||||  ||   GAGCC CGCA GC     GCGAC  GG                              U GA     -    C  UCGCC     UA  ACCCCCGGUUGUCGCCACAGUAGAGCUCCG |
Stem-loop sequence | CUCGGAGUGUCGUUGUCGCUCGUUCCUGGUGGAGCGCCGCCGUCGGUCGCCUGCCUCGAGAUGACACCGCUGUUGGCCCCCAGGAUCAGCGCCGCUCGCACGCCCGAGAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020544200.1 |
|
1.5 | PREDICTED: Zea mays uncharacterized LOC109942302 (LOC109942302), mRNA | NA | coding protein | psRNATarget | |||||||||
EU948271.1 |
|
2.5 | Zea mays clone 372147 mRNA sequence | NA | coding protein | psRNATarget |