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BaseInfo

ncRNA ID	novel_zma_miR10151
Species	Zea mays
Class	miRNA
Genome position	Chr7:99719019-99719112 [-]
Reference genome	RefGen_v4
Source	SRR5099742
Length	23
Mature sequence(if miRNA)	72 - ACUGCGGACUCCAAAACUGAAUU - 94
Stem-loop(if miRNA)	--A UG    ---       ACU        CAAAGG -- AAGGCGAUGGUU    C  CGGA   CUCCAAA   GAAUUAUG      C  U            U    |  ||||   |||||||   ||||||||      |  |            U    G  GUUU   GGGGUUU   UUUAAUAC      A  C            A UCA GU    UAC       ---        -----U GU ACAUAGGGUUGG
Stem-loop sequence	ACUGCGGACUCCAAAACUGAAUUAUGCAAAGGCUAAGGCGAUGGUUUUAGGUUGGGAUACACUGAUCAUAAUUUUUUGGGGCAUUUUGUGGACU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ241649.1	ncRNA:23   UUAAGUCAAAACCUCAGGCGUCA   1   |||||||||||*||||||||||| targets:30   AAUUCAGUUUUAGAGUCCGCAGU   52 Target Full Sequence	1.5	Sequence 7644 from Patent EP2985353	NA	coding protein	psRNATarget
JB169980.1	ncRNA:23   UUAAGUCAAAACCUCAGGCGUCA   1   |||||||||||*||||||||||| targets:30   AAUUCAGUUUUAGAGUCCGCAGU   52 Target Full Sequence	1.5	Sequence 7644 from Patent EP2559767	NA	coding protein	psRNATarget
HI409519.1	ncRNA:23   UUAAGUCAAAACCUCAGGCGUCA   1   |||||||||||*||||||||||| targets:30   AAUUCAGUUUUAGAGUCCGCAGU   52 Target Full Sequence	1.5	Sequence 7644 from Patent EP2074227	NA	coding protein	psRNATarget
XM_020537853.1	ncRNA:23   UUAAGUCAAAACCUCAGGCGUCA   1   ***||||||||||||||||*||* targets:1012   CCAUCAGUUUUGGAGUCCGGAGG   1034 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103631928 (LOC103631928), mRNA	NA	coding protein	psRNATarget
BT064683.1	ncRNA:23   UUAAGUCAAAACCUCAGGCGUCA   1   ***||||||||||||||||*||* targets:1176   CCAUCAGUUUUGGAGUCCGGAGG   1198 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0027K19 mRNA, complete cds	NA	coding protein	psRNATarget
EU961874.1	ncRNA:23   UUAAGUCAAAACCUCAGGCGUCA   1   ***||||||||||||||||*||* targets:1096   CCAUCAGUUUUGGAGUCCGGAGG   1118 Target Full Sequence	2.5	Zea mays clone 238813 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
BT065777.1	ncRNA:23   UUAAGUCAAAACCUCAGGCGUCA   1   ***||||||||||||||||*||* targets:1330   CCAUCAGUUUUGGAGUCCGGAGG   1352 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0087I11 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020537856.1	ncRNA:23   UUAAGUCAAAACCUCAGGCGUCA   1   ***||||||||||||||||*||* targets:1244   CCAUCAGUUUUGGAGUCCGGAGG   1266 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC109939611 (LOC109939611), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020537857.1	ncRNA:23   UUAAGUCAAAACCUCAGGCGUCA   1   ***||||||||||||||||*||* targets:1353   CCAUCAGUUUUGGAGUCCGGAGG   1375 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC109939611 (LOC109939611), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020537854.1	ncRNA:23   UUAAGUCAAAACCUCAGGCGUCA   1   ***||||||||||||||||*||* targets:1357   CCAUCAGUUUUGGAGUCCGGAGG   1379 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC109939611 (LOC109939611), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020537855.1	ncRNA:23   UUAAGUCAAAACCUCAGGCGUCA   1   ***||||||||||||||||*||* targets:1360   CCAUCAGUUUUGGAGUCCGGAGG   1382 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC109939611 (LOC109939611), transcript variant X2, mRNA	NA	coding protein	psRNATarget