Search result

BaseInfo

ncRNA ID	novel_zma_miR10149
Species	Zea mays
Class	miRNA
Genome position	Chr7:24040782-24040856 [+]
Reference genome	RefGen_v4
Source	SRR5099742
Length	24
Mature sequence(if miRNA)	1 - AUUUGUAGAAACCUAGGAGAACUA - 24
Stem-loop(if miRNA)	--AUU                       CA      CA      UGUAGAAACCUAGGAGAACUACA  UGAAAU  U      |||||||||||||||||||||||  ||||||      ACAUCUUUGGAUCCUCUUGAUGU  ACUUUG  A GAUAC                       -A      AG
Stem-loop sequence	AUUUGUAGAAACCUAGGAGAACUACACAUGAAAUCAUAGAGUUUCAAUGUAGUUCUCCUAGGUUUCUACACAUAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ235339.1	ncRNA:24   AUCAAGAGGAUCCAAAGAUGUUUA   1   |||||||||||||||||||||*|| targets:140   UAGUUCUCCUAGGUUUCUACACAU   163 Target Full Sequence	1.5	Sequence 1334 from Patent EP2985353	NA	coding protein	psRNATarget
JB163670.1	ncRNA:24   AUCAAGAGGAUCCAAAGAUGUUUA   1   |||||||||||||||||||||*|| targets:140   UAGUUCUCCUAGGUUUCUACACAU   163 Target Full Sequence	1.5	Sequence 1334 from Patent EP2559767	NA	coding protein	psRNATarget
HI403209.1	ncRNA:24   AUCAAGAGGAUCCAAAGAUGUUUA   1   |||||||||||||||||||||*|| targets:140   UAGUUCUCCUAGGUUUCUACACAU   163 Target Full Sequence	1.5	Sequence 1334 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235330.1	ncRNA:24   AUCAAGAGGAUCCAAAGAUGUUUA   1   ||||||||=||||||||||||*|| targets:66   UAGUUCUCUUAGGUUUCUACAUAU   89 Target Full Sequence	2.5	Sequence 1325 from Patent EP2985353	NA	coding protein	psRNATarget
HI403200.1	ncRNA:24   AUCAAGAGGAUCCAAAGAUGUUUA   1   ||||||||=||||||||||||*|| targets:66   UAGUUCUCUUAGGUUUCUACAUAU   89 Target Full Sequence	2.5	Sequence 1325 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235098.1	ncRNA:24   AUCAAGAGGAUCCAAAGAUGUUUA   1   ||||||||=||||||||||||*|| targets:66   UAGUUCUCUUAGGUUUCUACACAU   89 Target Full Sequence	2.5	Sequence 1093 from Patent EP2985353	NA	coding protein	psRNATarget
JB163661.1	ncRNA:24   AUCAAGAGGAUCCAAAGAUGUUUA   1   ||||||||=||||||||||||*|| targets:66   UAGUUCUCUUAGGUUUCUACAUAU   89 Target Full Sequence	2.5	Sequence 1325 from Patent EP2559767	NA	coding protein	psRNATarget
HI402968.1	ncRNA:24   AUCAAGAGGAUCCAAAGAUGUUUA   1   ||||||||=||||||||||||*|| targets:66   UAGUUCUCUUAGGUUUCUACACAU   89 Target Full Sequence	2.5	Sequence 1093 from Patent EP2074227	NA	coding protein	psRNATarget
JB163429.1	ncRNA:24   AUCAAGAGGAUCCAAAGAUGUUUA   1   ||||||||=||||||||||||*|| targets:66   UAGUUCUCUUAGGUUUCUACACAU   89 Target Full Sequence	2.5	Sequence 1093 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235332.1	ncRNA:24   AUCAAGAGGAUCCAAAGAUGUUUA   1   ||||||||=||||||||||||*|| targets:64   UAGUUCUCUUAGGUUUCUACACAU   87 Target Full Sequence	2.5	Sequence 1327 from Patent EP2985353	NA	coding protein	psRNATarget
HI403202.1	ncRNA:24   AUCAAGAGGAUCCAAAGAUGUUUA   1   ||||||||=||||||||||||*|| targets:64   UAGUUCUCUUAGGUUUCUACACAU   87 Target Full Sequence	2.5	Sequence 1327 from Patent EP2074227	NA	coding protein	psRNATarget
JB163663.1	ncRNA:24   AUCAAGAGGAUCCAAAGAUGUUUA   1   ||||||||=||||||||||||*|| targets:64   UAGUUCUCUUAGGUUUCUACACAU   87 Target Full Sequence	2.5	Sequence 1327 from Patent EP2559767	NA	coding protein	psRNATarget
HI410095.1	ncRNA:24   AUCAAGAGGAUCCAAAGAUGUUUA   1   ||||||||=||||||||||||*|| targets:63   UAGUUCUCUUAGGUUUCUACACAU   86 Target Full Sequence	2.5	Sequence 8220 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242225.1	ncRNA:24   AUCAAGAGGAUCCAAAGAUGUUUA   1   ||||||||=||||||||||||*|| targets:63   UAGUUCUCUUAGGUUUCUACACAU   86 Target Full Sequence	2.5	Sequence 8220 from Patent EP2985353	NA	coding protein	psRNATarget
JB170556.1	ncRNA:24   AUCAAGAGGAUCCAAAGAUGUUUA   1   ||||||||=||||||||||||*|| targets:63   UAGUUCUCUUAGGUUUCUACACAU   86 Target Full Sequence	2.5	Sequence 8220 from Patent EP2559767	NA	coding protein	psRNATarget
HI403226.1	ncRNA:24   AUCAAGAGGAUCCAAAGAUGUUUA   1   |=||||||=||||||||||||*|| targets:66   UGGUUCUCUUAGGUUUCUACACAU   89 Target Full Sequence	2.5	Sequence 1351 from Patent EP2074227	NA	coding protein	psRNATarget
HI403196.1	ncRNA:24   AUCAAGAGGAUCCAAAGAUGUUUA   1   |=||||||=||||||||||||*|| targets:66   UGGUUCUCUUAGGUUUCUACACAU   89 Target Full Sequence	2.5	Sequence 1321 from Patent EP2074227	NA	coding protein	psRNATarget
HI403250.1	ncRNA:24   AUCAAGAGGAUCCAAAGAUGUUUA   1   |=||||||=||||||||||||*|| targets:66   UGGUUCUCUUAGGUUUCUACACAU   89 Target Full Sequence	2.5	Sequence 1375 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235326.1	ncRNA:24   AUCAAGAGGAUCCAAAGAUGUUUA   1   |=||||||=||||||||||||*|| targets:66   UGGUUCUCUUAGGUUUCUACACAU   89 Target Full Sequence	2.5	Sequence 1321 from Patent EP2985353	NA	coding protein	psRNATarget
HI403203.1	ncRNA:24   AUCAAGAGGAUCCAAAGAUGUUUA   1   |=||||||=||||||||||||*|| targets:66   UGGUUCUCUUAGGUUUCUACACAU   89 Target Full Sequence	2.5	Sequence 1328 from Patent EP2074227	NA	coding protein	psRNATarget
JB163711.1	ncRNA:24   AUCAAGAGGAUCCAAAGAUGUUUA   1   |=||||||=||||||||||||*|| targets:66   UGGUUCUCUUAGGUUUCUACACAU   89 Target Full Sequence	2.5	Sequence 1375 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235333.1	ncRNA:24   AUCAAGAGGAUCCAAAGAUGUUUA   1   |=||||||=||||||||||||*|| targets:66   UGGUUCUCUUAGGUUUCUACACAU   89 Target Full Sequence	2.5	Sequence 1328 from Patent EP2985353	NA	coding protein	psRNATarget
HI403237.1	ncRNA:24   AUCAAGAGGAUCCAAAGAUGUUUA   1   |=||||||=||||||||||||*|| targets:66   UGGUUCUCUUAGGUUUCUACACAU   89 Target Full Sequence	2.5	Sequence 1362 from Patent EP2074227	NA	coding protein	psRNATarget
JB163713.1	ncRNA:24   AUCAAGAGGAUCCAAAGAUGUUUA   1   |=||||||=||||||||||||*|| targets:66   UGGUUCUCUUAGGUUUCUACACAU   89 Target Full Sequence	2.5	Sequence 1377 from Patent EP2559767	NA	coding protein	psRNATarget
HI403252.1	ncRNA:24   AUCAAGAGGAUCCAAAGAUGUUUA   1   |=||||||=||||||||||||*|| targets:66   UGGUUCUCUUAGGUUUCUACACAU   89 Target Full Sequence	2.5	Sequence 1377 from Patent EP2074227	NA	coding protein	psRNATarget
JB163664.1	ncRNA:24   AUCAAGAGGAUCCAAAGAUGUUUA   1   |=||||||=||||||||||||*|| targets:66   UGGUUCUCUUAGGUUUCUACACAU   89 Target Full Sequence	2.5	Sequence 1328 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235356.1	ncRNA:24   AUCAAGAGGAUCCAAAGAUGUUUA   1   |=||||||=||||||||||||*|| targets:66   UGGUUCUCUUAGGUUUCUACACAU   89 Target Full Sequence	2.5	Sequence 1351 from Patent EP2985353	NA	coding protein	psRNATarget
JB163698.1	ncRNA:24   AUCAAGAGGAUCCAAAGAUGUUUA   1   |=||||||=||||||||||||*|| targets:66   UGGUUCUCUUAGGUUUCUACACAU   89 Target Full Sequence	2.5	Sequence 1362 from Patent EP2559767	NA	coding protein	psRNATarget
JB163687.1	ncRNA:24   AUCAAGAGGAUCCAAAGAUGUUUA   1   |=||||||=||||||||||||*|| targets:66   UGGUUCUCUUAGGUUUCUACACAU   89 Target Full Sequence	2.5	Sequence 1351 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235382.1	ncRNA:24   AUCAAGAGGAUCCAAAGAUGUUUA   1   |=||||||=||||||||||||*|| targets:66   UGGUUCUCUUAGGUUUCUACACAU   89 Target Full Sequence	2.5	Sequence 1377 from Patent EP2985353	NA	coding protein	psRNATarget
LQ235380.1	ncRNA:24   AUCAAGAGGAUCCAAAGAUGUUUA   1   |=||||||=||||||||||||*|| targets:66   UGGUUCUCUUAGGUUUCUACACAU   89 Target Full Sequence	2.5	Sequence 1375 from Patent EP2985353	NA	coding protein	psRNATarget
JB163657.1	ncRNA:24   AUCAAGAGGAUCCAAAGAUGUUUA   1   |=||||||=||||||||||||*|| targets:66   UGGUUCUCUUAGGUUUCUACACAU   89 Target Full Sequence	2.5	Sequence 1321 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235367.1	ncRNA:24   AUCAAGAGGAUCCAAAGAUGUUUA   1   |=||||||=||||||||||||*|| targets:66   UGGUUCUCUUAGGUUUCUACACAU   89 Target Full Sequence	2.5	Sequence 1362 from Patent EP2985353	NA	coding protein	psRNATarget