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BaseInfo

ncRNA ID	novel_zma_miR10148
Species	Zea mays
Class	miRNA
Genome position	Chr7:113877191-113877278 [-]
Reference genome	RefGen_v4
Source	SRR5099742
Length	24
Mature sequence(if miRNA)	65 - AGGAGAUUGGAGGGGCUAGAAUCC - 88
Stem-loop(if miRNA)	---A  A                    C        CAA    AA     GG GAUUGGAGGGGCUAGAAUCC UAUCUUAU   AUAA  C     || |||||||||||||||||||| ||||||||   ||||     CC CUAAUCUCUCCGAUUUUAGG GUAGAAUA   UAUU  A CUUA  -                    A        AAC    CU
Stem-loop sequence	AGGAGAUUGGAGGGGCUAGAAUCCCUAUCUUAUCAAAUAAAACAUCUUAUCAAAUAAGAUGAGGAUUUUAGCCUCUCUAAUCCCAUUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020539411.1	ncRNA:24   CCUAAGAUCGGGGAGGUUAGAGGA   1   |||||=||||||||||||||*||| targets:3494   GGAUUUUAGCCCCUCCAAUCCCCU   3517 Target Full Sequence	2.5	PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X7, mRNA	NA	coding protein	psRNATarget
XM_020539397.1	ncRNA:24   CCUAAGAUCGGGGAGGUUAGAGGA   1   |||||=||||||||||||||*||| targets:3529   GGAUUUUAGCCCCUCCAAUCCCCU   3552 Target Full Sequence	2.5	PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X3, mRNA	NA	coding protein	psRNATarget
JB163474.1	ncRNA:24   CCUAAGAUCGGGGAGGUUAGAGGA   1   *||||=*|*||||||||||||||| targets:35   UGAUUUAAUCCCCUCCAAUCUCCU   58 Target Full Sequence	3.0	Sequence 1138 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235143.1	ncRNA:24   CCUAAGAUCGGGGAGGUUAGAGGA   1   *||||=*|*||||||||||||||| targets:35   UGAUUUAAUCCCCUCCAAUCUCCU   58 Target Full Sequence	3.0	Sequence 1138 from Patent EP2985353	NA	coding protein	psRNATarget
HI403013.1	ncRNA:24   CCUAAGAUCGGGGAGGUUAGAGGA   1   *||||=*|*||||||||||||||| targets:35   UGAUUUAAUCCCCUCCAAUCUCCU   58 Target Full Sequence	3.0	Sequence 1138 from Patent EP2074227	NA	coding protein	psRNATarget
NM_001155101.1	ncRNA:24   CCUAAGAUCGGGGAGGUUAGAGGA   1   *|||*|||||||||||*||||||* targets:80   CGAUCCUAGCCCCUCCCAUCUCCA   103 Target Full Sequence	2.5	Zea mays electron transporter/ thiol-disulfide exchange intermediate (LOC100282189), mRNA	NA	coding protein	psRNATarget
EU959971.1	ncRNA:24   CCUAAGAUCGGGGAGGUUAGAGGA   1   *|||*|||||||||||*||||||* targets:80   CGAUCCUAGCCCCUCCCAUCUCCA   103 Target Full Sequence	2.5	Zea mays clone 220915 electron transporter/ thiol-disulfide exchange intermediate mRNA, complete cds	NA	coding protein	psRNATarget