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BaseInfo

ncRNA ID novel_zma_miR10141
Species Zea mays
Class miRNA
Genome position Chr7:175617852-175617937 [-]
Reference genome RefGen_v4
Source SRR5099742
Length 20
Mature sequence(if miRNA) 67 - CAGGAUCAUGGGAGGAUUGG - 86
Stem-loop(if miRNA) --C                      U       G       UA
   AGGAUCAUGGGAGGAUUGGAGG GAUUGAG GGGAAAU  G
   |||||||||||||||||||||| ||||||| |||||||
   UCCUAGUGUCCUCCUAACCUCU CUAACUC CUCUUUA  U
UUC                      C       G       UU
Stem-loop sequence CAGGAUCAUGGGAGGAUUGGAGGUGAUUGAGGGGGAAAUUAGUUUAUUUCUCGCUCAAUCCUCUCCAAUCCUCCUGUGAUCCUCUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ516915.1
ncRNA:20   GGUUAGGAGGGUACUAGGAC   1
  |=||||||||||||||*|||
targets:131   CUAAUCCUCCCAUGAUGCUG   150

2.5 TSA: Zea mays cultivar W22 CL307Contig1.betc, mRNA sequence NA coding protein psRNATarget
XM_020551688.1
ncRNA:20   GGUUAGGAGGGUACUAGGAC   1
  ||=|||||||||||||||*|
targets:2166   CCGAUCCUCCCAUGAUCCCG   2185

2.5 PREDICTED: Zea mays hypothetical protein (LOC100383632), transcript variant X1, mRNA NA coding protein psRNATarget