ncRNA ID | novel_zma_miR10141 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr7:175617852-175617937 [-] |
Reference genome | RefGen_v4 |
Source | SRR5099742 |
Length | 20 |
Mature sequence(if miRNA) | 67 - CAGGAUCAUGGGAGGAUUGG - 86 |
Stem-loop(if miRNA) |
--C                      U       G       UA    AGGAUCAUGGGAGGAUUGGAGG GAUUGAG GGGAAAU  G    |||||||||||||||||||||| ||||||| |||||||    UCCUAGUGUCCUCCUAACCUCU CUAACUC CUCUUUA  U UUC                      C       G       UU |
Stem-loop sequence | CAGGAUCAUGGGAGGAUUGGAGGUGAUUGAGGGGGAAAUUAGUUUAUUUCUCGCUCAAUCCUCUCCAAUCCUCCUGUGAUCCUCUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ516915.1 |
|
2.5 | TSA: Zea mays cultivar W22 CL307Contig1.betc, mRNA sequence | NA | coding protein | psRNATarget | |||||||||
XM_020551688.1 |
|
2.5 | PREDICTED: Zea mays hypothetical protein (LOC100383632), transcript variant X1, mRNA | NA | coding protein | psRNATarget |