Search result

BaseInfo

ncRNA ID	osa-miRf10611-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - UACCGGUUGGUAACACCAACCGG - NA
Stem-loop(if miRNA)	A           C         G         ---------   -  -G   GCCUGACAAG GAUCUUUAGU CCGGUUGGUAA ACCAACCGG ACUAAAGAU         UCC GG  GGG          C |||||||||| ||||||||||| ||||||||| |||||||||         ||| ||  ||| CUAGAAAUCA GGCCAACCAUU UGGUUGGCC UGAUUUUUA         AGG CC  GUU          C           G           A         G         AUAGAAAUC   A  AA   UACGACAGUC
Stem-loop sequence	GAUCUUUAGUACCGGUUGGUAACACCAACCGGGACUAAAGAUUCCGGGGGGGCCUGACAAGCCCUGACAGCAUUUGAACCAGGACUAAAGAUAAUUUUUAGUGCCGGUUGGUAUUACCAACCGGGACUAAAGAUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015755226.1	ncRNA:23   GGCCAACCACAAUGGUUGGCCAU   1   |||||||*||||||||||||||| targets:81   CCGGUUGAUGUUACCAACCGGUA   103 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278786 (LOC107278786), mRNA	uncharacterized LOC107278786(LOC107278786)	coding protein	psRNATarget
AK289098.1	ncRNA:23   GGCCAACCACAAUGGUUGGCCAU   1   |||||||||||||||||||||*| targets:158   CCGGUUGGUGUUACCAACCGGGA   180 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK289098.1	ncRNA:23   GGCCAACCACAAUGGUUGGCCAU   1   |||||||||*|||||||||||*| targets:115   CCGGUUGGUUUUACCAACCGGGA   137 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK288796.1	ncRNA:23   GGCCAACCACAAUGGUUGGCCAU   1   |||||||||||||||||||||*| targets:1841   CCGGUUGGUGUUACCAACCGGAA   1863 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090070F05, full insert sequence	NA	coding protein	psRNATarget
AK065811.1	ncRNA:23   GGCCAACCACAAUGGUUGGCCAU   1   ||||||*||||||=||||||||| targets:1176   CCGGUUUGUGUUAUCAACCGGUA   1198 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013039F07, full insert sequence	NA	coding protein	psRNATarget
AK119916.1	ncRNA:23   GGCCAACCACAAUGGUUGGCCAU   1   =||||||*||||||=|||||||| targets:375   UCGGUUGAUGUUACUAACCGGUA   397 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-183-F10, full insert sequence	NA	coding protein	psRNATarget
XM_015758314.1	ncRNA:23   GGCCAACCACAAUGGUUGGCCAU   1   ||||||*||||||||||||||*| targets:917   CCGGUUUGUGUUACCAACCGGGA   939 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278346 (LOC107278346), transcript variant X1, mRNA	uncharacterized LOC107278346(LOC107278346)	coding protein	psRNATarget
AK288424.1	ncRNA:23   GGCCAACCACAAUGGUUGGCCAU   1   ||||||*||||||||||||||*| targets:2392   CCGGUUAGUGUUACCAACCGGGA   2414 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence	NA	coding protein	psRNATarget
AK288405.1	ncRNA:23   GGCCAACCACAAUGGUUGGCCAU   1   ||*||||||||||||||||||*| targets:2399   CCCGUUGGUGUUACCAACCGGGA   2421 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090030E11, full insert sequence	NA	coding protein	psRNATarget