ncRNA ID | novel_zma_miR10132 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:151683602-151683683 [+] |
Reference genome | RefGen_v4 |
Source | SRR5099742;SRR1583942 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AAUCCCCUUCAGGAUUGGAGG - 21 |
Stem-loop(if miRNA) |
--          AG       G       AU U     AGA   AAUCCCCUUC  GAUUGGA GGGAUUG  G GGAAA   A   ||||||||||  ||||||| |||||||  | |||||   UUAGGGGAAG  CUAACUU CCCUAAU  C CCUUU   C GU          CU       A       CU U     AAU |
Stem-loop sequence | AAUCCCCUUCAGGAUUGGAGGGGAUUGAUGUGGAAAAGAACUAAUUUCCUCUCUAAUCCCAUUCAAUCUCGAAGGGGAUUUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ069159.1 |
|
2.5 | TSA: Zea mays contig04794, mRNA sequence | NA | coding protein | psRNATarget | |||||||||
XM_020546797.1 |
|
2.5 | PREDICTED: Zea mays protein TIFY 11d (LOC103643602), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_008666766.2 |
|
2.5 | PREDICTED: Zea mays protein TIFY 11d (LOC103643602), transcript variant X1, mRNA | NA | coding protein | psRNATarget |