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BaseInfo

ncRNA ID	ath-miRf10109-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - UGGAGUGGACGAGGGAAUCU - NA
Stem-loop(if miRNA)	CUUU        -A        A    ----   --G  U     AU      ---   CGUAAA     A GCUUC    GGGUUCUU  GUCCACUC GGUA    UCG   GA CCCAA  GUCUCU   GCU      AUAGC G |||||    ||||||||  |||||||| ||||    |||   || |||||  ||||||   |||      ||||| CGAGG    UCUAAGGG  CAGGUGAG UCAU    AGC   CU GGGUU  CAGAGG   UGA      UGUCG U      UUUU        AG        G    GAGC   AGG  -     --      AAU   -AAUAG     C
Stem-loop sequence	GCUUCCUUUGGGUUCUUAGUCCACUCAGGUAUCGGGAUCCCAAAUGUCUCUGCUCGUAAAAUAGCAGUCGCUGUGAUAAAGUUAAGGAGACUUGGGUCGGACGACGAGUACUGGAGUGGACGAGGGAAUCUUUUUGGAGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_128566.4	ncRNA:20   UCUAAGGGAGCAGGUGAGGU   1   |||||||||||||||||||| targets:2547   AGAUUCCCUCGUCCACUCCA   2566 Target Full Sequence	0.0	Arabidopsis thaliana ubiquitin-activating enzyme 1 (UBA1), mRNA	ubiquitin-activating enzyme 1(UBA1)	coding protein	psRNATarget
AY090248.1	ncRNA:20   UCUAAGGGAGCAGGUGAGGU   1   |||||||||||||||||||| targets:2398   AGAUUCCCUCGUCCACUCCA   2417 Target Full Sequence	0.0	Arabidopsis thaliana At2g30110/T27E13.15 mRNA, complete cds	NA	coding protein	psRNATarget
BT006363.1	ncRNA:20   UCUAAGGGAGCAGGUGAGGU   1   |||||||||||||||||||| targets:2314   AGAUUCCCUCGUCCACUCCA   2333 Target Full Sequence	0.0	Arabidopsis thaliana At2g30110/T27E13.15 gene, complete cds	NA	coding protein	psRNATarget
BX820519.1	ncRNA:20   UCUAAGGGAGCAGGUGAGGU   1   |||||||||||||||||||| targets:244   AGAUUCCCUCGUCCACUCCA   263 Target Full Sequence	0.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH43ZE11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
NM_120729.4	ncRNA:20   UCUAAGGGAGCAGGUGAGGU   1   |||||=|||||*|||||||| targets:2433   AGAUUUCCUCGCCCACUCCA   2452 Target Full Sequence	2.5	Arabidopsis thaliana ubiquitin activating enzyme 2 (UBA 2), mRNA	ubiquitin activating enzyme 2(UBA 2)	coding protein	psRNATarget