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BaseInfo

ncRNA ID novel_zma_miR10117
Species Zea mays
Class miRNA
Genome position Chr6:27744598-27744650 [-]
Reference genome RefGen_v4
Source SRR5099742
Length 24
Mature sequence(if miRNA) 30 - ACUUCUUGUCGGCGUUUCGAGACC - 53
Stem-loop(if miRNA) --    -         GUU     -   G
  ACUU CUUGUCGGC   UCGAG ACC G
  |||| |||||||||   ||||| |||
  UGAG GAGCAGCCG   AGUUC UGG G
UG    U         ---     C   G
Stem-loop sequence ACUUCUUGUCGGCGUUUCGAGACCGGGGGGUCCUUGAGCCGACGAGUGAGUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020541001.1
ncRNA:24   CCAGAGCUUUGCGGCUGUUCUUCA   1
  ||**||||||||||||||=|||||
targets:6145   GGAGUCGAAACGCCGACAGGAAGU   6168

1.5 PREDICTED: Zea mays plasma membrane ATPase 2-like (LOC103632998), transcript variant X36, mRNA NA coding protein psRNATarget