ncRNA ID | novel_zma_miR10116 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr6:54923020-54923241 [-] |
Reference genome | RefGen_v4 |
Source | SRR5099742 |
Length | 22 |
Mature sequence(if miRNA) | 1 - AUUUUCAUAGGCGGGCUGCUUA - 22 |
Stem-loop(if miRNA) |
--        A           A                                            U     A   UG  G    G      A            AUAAU   AGCAGCCC CCUGUGAAAAU AUGUUUCCACAUGCGGUUUCUUAAGCAAACCGCUAGUGCUAAUG UAUUU CAU  GU GUUU CUUAAG AAAUCGCCAGUG     A   |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||  || |||| |||||| ||||||||||||     A   UCGUCGGG GGAUACUUUUA UACAAAGGUGUACGCCAAAGAAUUCGUUUGGCGGUCACGAUUAU AUAAA GUG  CG CAAA GAAUUC UUUGGCGGUCAC     U AU        C           C                                            U     G   UA  A    -      G            GACUA |
Stem-loop sequence | AGCAGCCCACCUGUGAAAAUAAUGUUUCCACAUGCGGUUUCUUAAGCAAACCGCUAGUGCUAAUGUUAUUUACAUUGGUGGUUUGCUUAAGAAAAUCGCCAGUGAUAAUAAUAUCAGCACUGGCGGUUUGCUUAAGAAACAGCAUGUGGAAAUAUUAUUAGCACUGGCGGUUUGCUUAAGAAACCGCAUGUGGAAACAUCAUUUUCAUAGGCGGGCUGCUUA |