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BaseInfo

ncRNA ID	osa-miRf10608-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - GUUGGUGUUAUCAACCGGGA - NA
Stem-loop(if miRNA)	U      C A        U                   -AUC GG    CUGACAAGGCCUGA  UUAGUC C GUUGGUGU AUCAACCGGGACUAAAGAU    G  GGGC              C  |||||| | |||||||| |||||||||||||||||||    |  ||||              A  AAUCAG G CAACCACA UGGUUGGCCCUGAUUUUUA    A  AAUC              G A      A C        -                   CUAG --    AGGGCCAAGAUUUA
Stem-loop sequence	UUUAGUCCCAGUUGGUGUUAUCAACCGGGACUAAAGAUAUCGGGGGGCCUGACAAGGCCUGACAGAUUUAGAACCGGGACUAAAGAUCAUUUUUAGUCCCGGUUGGUACACCAACCGAGACUAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK242216.1	ncRNA:20   AGGGCCAACUAUUGUGGUUG   1   |||||||||=|||||||||| targets:667   UCCCGGUUGGUAACACCAAC   686 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J075172F09, full insert sequence	NA	coding protein	psRNATarget
XM_015779829.1	ncRNA:20   AGGGCCAACUAUUGUGGUUG   1   |||||||||=|||||||||| targets:1709   UCCCGGUUGGUAACACCAAC   1728 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4335182 (LOC4335182), mRNA	uncharacterized LOC4335182(LOC4335182)	coding protein	psRNATarget
AK289098.1	ncRNA:20   AGGGCCAACUAUUGUGGUUG   1   |||||||||=|||||||||| targets:247   UCCCGGUUGGUAACACCAAC   266 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK288224.1	ncRNA:20   AGGGCCAACUAUUGUGGUUG   1   |||||||||=|||||||||| targets:1852   UCCCGGUUGGUAACACCAAC   1871 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090012B15, full insert sequence	NA	coding protein	psRNATarget
AK288224.1	ncRNA:20   AGGGCCAACUAUUGUGGUUG   1   ||||||||||||||||*||| targets:1269   UCCCGGUUGAUAACACAAAC   1288 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090012B15, full insert sequence	NA	coding protein	psRNATarget
AK288734.1	ncRNA:20   AGGGCCAACUAUUGUGGUUG   1   |||||||||=|||||||||| targets:56   UCCCGGUUGGUAACACCAAC   75 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090063I24, full insert sequence	NA	coding protein	psRNATarget
AK119354.1	ncRNA:20   AGGGCCAACUAUUGUGGUUG   1   |||=|||||=|||||||||| targets:74   UCCUGGUUGGUAACACCAAC   93 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:001-131-F10, full insert sequence	NA	coding protein	psRNATarget
XM_015792800.1	ncRNA:20   AGGGCCAACUAUUGUGGUUG   1   |||=|||||=|||||||||| targets:683   UCCUGGUUGGUAACACCAAC   702 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4346359 (LOC4346359), transcript variant X3, mRNA	uncharacterized LOC4346359(LOC4346359)	coding protein	psRNATarget
AK121472.1	ncRNA:20   AGGGCCAACUAUUGUGGUUG   1   |=|||||||=|||||||||| targets:2069   UUCCGGUUGGUAACACCAAC   2088 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023148H10, full insert sequence	NA	coding protein	psRNATarget
AK121178.1	ncRNA:20   AGGGCCAACUAUUGUGGUUG   1   |||=|||||=|||||||||| targets:1944   UCCUGGUUGGUAACACCAAC   1963 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023083G22, full insert sequence	NA	coding protein	psRNATarget
AK288624.1	ncRNA:20   AGGGCCAACUAUUGUGGUUG   1   |||=|||||=|||||||||| targets:5005   UCCUGGUUGGUAACACCAAC   5024 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090054H14, full insert sequence	NA	coding protein	psRNATarget
AK288438.1	ncRNA:20   AGGGCCAACUAUUGUGGUUG   1   *||||||||=|||||||||| targets:1320   CCCCGGUUGGUAACACCAAC   1339 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090034C21, full insert sequence	NA	coding protein	psRNATarget