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BaseInfo

ncRNA ID	novel_zma_miR10106
Species	Zea mays
Class	miRNA
Genome position	Chr6:2026616-2026703 [+]
Reference genome	RefGen_v4
Source	SRR5099742
Length	21
Mature sequence(if miRNA)	68 - AAGGAACCGCCAGUGGAAAUG - 88
Stem-loop(if miRNA)	--        U       A     CA                CG   UUUCCACU GCGGUUC CUUAA  CAACCGCUAGUGGAAA  G   |||||||| ||||||| |||||  ||||||||||||||||  G   AAAGGUGA CGCCAAG GAAUU  GUUGGCGGUCACCUUU  C GU        C       -     CG                AU
Stem-loop sequence	UUUCCACUUGCGGUUCACUUAACACAACCGCUAGUGGAAACGGGCUAUUUCCACUGGCGGUUGGCUUAAGGAACCGCCAGUGGAAAUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001176701.1	ncRNA:21   GU-AAAGGUGACCGCCAAGGAA   1   ||-|||=||||||||||||||| targets:915   CACUUUUCACUGGCGGUUCCUU   936 Target Full Sequence	3.0	Zea mays uncharacterized LOC100384113 (LOC100384113), mRNA	NA	coding protein	psRNATarget
BT069194.2	ncRNA:21   GU-AAAGGUGACCGCCAAGGAA   1   ||-|||=||||||||||||||| targets:915   CACUUUUCACUGGCGGUUCCUU   936 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0304H22 mRNA, complete cds	NA	coding protein	psRNATarget
LQ235114.1	ncRNA:21   GUAAAGGUGACCGCCAAGGAA   1   =|||||=||*||||||||||| targets:35   UAUUUCUACAGGCGGUUCCUU   55 Target Full Sequence	2.5	Sequence 1109 from Patent EP2985353	NA	coding protein	psRNATarget
HI402984.1	ncRNA:21   GUAAAGGUGACCGCCAAGGAA   1   =|||||=||*||||||||||| targets:35   UAUUUCUACAGGCGGUUCCUU   55 Target Full Sequence	2.5	Sequence 1109 from Patent EP2074227	NA	coding protein	psRNATarget
JB163445.1	ncRNA:21   GUAAAGGUGACCGCCAAGGAA   1   =|||||=||*||||||||||| targets:35   UAUUUCUACAGGCGGUUCCUU   55 Target Full Sequence	2.5	Sequence 1109 from Patent EP2559767	NA	coding protein	psRNATarget
JB163558.1	ncRNA:21   GUAAAGGUGACCGCCAAGGAA   1   *|||||=|*|||||||||||| targets:9   GAUUUCUAGUGGCGGUUCCUU   29 Target Full Sequence	2.5	Sequence 1222 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235227.1	ncRNA:21   GUAAAGGUGACCGCCAAGGAA   1   *|||||=|*|||||||||||| targets:9   GAUUUCUAGUGGCGGUUCCUU   29 Target Full Sequence	2.5	Sequence 1222 from Patent EP2985353	NA	coding protein	psRNATarget
HI403097.1	ncRNA:21   GUAAAGGUGACCGCCAAGGAA   1   *|||||=|*|||||||||||| targets:9   GAUUUCUAGUGGCGGUUCCUU   29 Target Full Sequence	2.5	Sequence 1222 from Patent EP2074227	NA	coding protein	psRNATarget