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BaseInfo

ncRNA ID	osa-miRf10607-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - UUAGACACCUCAGCGCCAAA - NA
Stem-loop(if miRNA)	C                  -AA    G    A  AAAUAUAC  UG UACGCUGACUUAGUC GGCGCUGAA UUAGACACCUCAGCGCCA   UAGC UGGC CU        GU  G               U ||||||||| ||||||||||||||||||   |||| |||| ||        ||  |               C CCGCGACUU AAUCUGUGGAGUCGCGGU   GUUG ACCG GA        CG  G               C          A                  ACA    -    C  ----CUUA  -- CAUGGUGGCACCUAC
Stem-loop sequence	GGCGCUGAACUUAGACACCUCAGCGCCAAAUAGCGUGGCACUAAAUAUACGUUGGUACGCUGACUUAGUCUCCCAUCCACGGUGGUACGGCAUUCAGCGCCAGUUGACAUGGCGCUGAGGUGUCUAAAUUCAGCGCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
CT837884.1	ncRNA:20   AAACCGCGACUCCACAGAUU   1   |||||||||||||||||||| targets:927   UUUGGCGCUGAGGUGUCUAA   946 Target Full Sequence	0.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA058P19, full insert sequence	NA	coding protein	psRNATarget
AK241139.1	ncRNA:20   AAACCGCGACUCCACAGAUU   1   |||||||||||||||||||| targets:922   UUUGGCGCUGAGGUGUCUAA   941 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA, clone: J065099H13, full insert sequence	NA	coding protein	psRNATarget
XM_015788685.1	ncRNA:20   AAACCGCGACUCCACAGAUU   1   |||||||=|||||||||||| targets:1638   UUUGGCGUUGAGGUGUCUAA   1657 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group probable inactive purple acid phosphatase 28 (LOC4341954), transcript variant X1, mRNA	probable inactive purple acid phosphatase 28(LOC4341954)	coding protein	psRNATarget
XM_015788686.1	ncRNA:20   AAACCGCGACUCCACAGAUU   1   |||||||=|||||||||||| targets:1756   UUUGGCGUUGAGGUGUCUAA   1775 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group probable inactive purple acid phosphatase 28 (LOC4341954), transcript variant X2, mRNA	probable inactive purple acid phosphatase 28(LOC4341954)	coding protein	psRNATarget
XM_015761838.1	ncRNA:20   AAACCGCGACUCCACAGAUU   1   |*|||||||||||||||||| targets:3749   UGUGGCGCUGAGGUGUCUAA   3768 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4350578 (LOC4350578), transcript variant X2, mRNA	uncharacterized LOC4350578(LOC4350578)	coding protein	psRNATarget
XM_015761837.1	ncRNA:20   AAACCGCGACUCCACAGAUU   1   |*|||||||||||||||||| targets:3752   UGUGGCGCUGAGGUGUCUAA   3771 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4350578 (LOC4350578), transcript variant X1, mRNA	uncharacterized LOC4350578(LOC4350578)	coding protein	psRNATarget
AK105004.2	ncRNA:20   AAACCGCGACUCCACAGAUU   1   **|||||||||||||||||| targets:382   CGUGGCGCUGAGGUGUCUAA   401 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:001-006-B03, full insert sequence	NA	coding protein	psRNATarget
XM_015766258.1	ncRNA:20   AAACCGCGACUCCACAGAUU   1   **|||||||||||||||||| targets:1207   CGUGGCGCUGAGGUGUCUAA   1226 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9269164 (LOC9269164), mRNA	uncharacterized LOC9269164(LOC9269164)	coding protein	psRNATarget
XM_015770638.1	ncRNA:20   AAACCGCGACUCCACAGAUU   1   **|||||=|||||||||||| targets:499   CGUGGCGUUGAGGUGUCUAA   518 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4329649 (LOC4329649), transcript variant X2, mRNA	uncharacterized LOC4329649(LOC4329649)	coding protein	psRNATarget
XM_015770637.1	ncRNA:20   AAACCGCGACUCCACAGAUU   1   **|||||=|||||||||||| targets:499   CGUGGCGUUGAGGUGUCUAA   518 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4329649 (LOC4329649), transcript variant X1, mRNA	uncharacterized LOC4329649(LOC4329649)	coding protein	psRNATarget
XM_015787734.1	ncRNA:20   AAACCGCGACUCCACAGAUU   1   ||||*|||||||||*||||| targets:30   UUUGACGCUGAGGUAUCUAA   49 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group probable serine/threonine-protein kinase At1g18390 (LOC4326070), mRNA	probable serine/threonine-protein kinase At1g18390(LOC4326070)	coding protein	psRNATarget