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BaseInfo

ncRNA ID	novel_zma_miR10089
Species	Zea mays
Class	miRNA
Genome position	Chr5:61864983-61865056 [+]
Reference genome	RefGen_v4
Source	SRR5099742
Length	21
Mature sequence(if miRNA)	54 - GGGAUUGAGUCAGUUUAAAUC - 74
Stem-loop(if miRNA)	--       C            A  A          A   UUUAAAC GACUCAAUCUUA CC AUGCAUAUGG U   ||||||| |||||||||||| || |||||||||| C   AAAUUUG CUGAGUUAGGGU GG UACGUGUACC A CU       A            -  C          U
Stem-loop sequence	UUUAAACCGACUCAAUCUUAACCAAUGCAUAUGGAUCAUCCAUGUGCAUCGGUGGGAUUGAGUCAGUUUAAAUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001350737.1	ncRNA:21   CUAAAUUUGACUGAGUUAGGG   1   ||||||||||||||||||*|| targets:4041   GAUUUAAACUGACUCAAUACC   4061 Target Full Sequence	1.5	Zea mays phospholipase D family protein (LOC100272416), mRNA	NA	coding protein	psRNATarget
BT069908.1	ncRNA:21   CUAAAUUUGACUGAGUUAGGG   1   ||||||||||*|||||||||| targets:249   GAUUUAAACUCACUCAAUCCC   269 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0320O20 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001176906.1	ncRNA:21   CUAAAUUUGACUGAGUUAGGG   1   ||||||||||*|||||||||| targets:249   GAUUUAAACUCACUCAAUCCC   269 Target Full Sequence	1.5	Zea mays uncharacterized LOC100384359 (LOC100384359), mRNA	NA	coding protein	psRNATarget
XM_008660174.2	ncRNA:21   CUAAAUUUGACUGAGUUAGGG   1   *|||||||||*|||||||||| targets:3582   AAUUUAAACUCACUCAAUCCC   3602 Target Full Sequence	1.5	PREDICTED: Zea mays Protein CHAPERONE-LIKE PROTEIN OF POR1 chloroplastic (LOC100276880), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020548575.1	ncRNA:21   CUAAAUUUGACUGAGUUAGGG   1   |||||||||*||||||||||* targets:2709   GAUUUAAACAGACUCAAUCCG   2729 Target Full Sequence	2.5	PREDICTED: Zea mays cysteine-rich receptor-like protein kinase 19 (LOC103647728), mRNA	NA	coding protein	psRNATarget