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BaseInfo

ncRNA ID osa-miRf10604-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - UGGCCUUCUACAUCUUCGUC - NA
Stem-loop(if miRNA)   G   A  C         ACA           UACAA  --   AGCCGGUGGAGA
GC GCC GC UGGCCUUCU   UCUUCGUCUUC     CU  UCA            A
|| ||| || |||||||||   |||||||||||     ||  |||            C
CG CGG CG ACCGGAGGA   AGGAGCAGAAG     GG  GCA            A
  A   G  -         -GG           ----C  CU   UGUCCAUGCCCA
Stem-loop sequence GCGGCCAGCCUGGCCUUCUACAUCUUCGUCUUCUACAACUUCAAGCCGGUGGAGAACAACCCGUACCUGUACGUCGGCGAAGACGAGGAGGAGGAGGCCAGCGGGCAGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK068710.1
ncRNA:20   CUGCUUCUACAUCUUCCGGU   1
  ||||=|||||*|||||||||
targets:1046   GACGGAGAUGGAGAAGGCCA   1065

2.5 Oryza sativa Japonica Group cDNA clone:J013159K10, full insert sequence NA coding protein psRNATarget
XM_015764710.1
ncRNA:20   CUGCUUCUACAUCUUCCGGU   1
  ||||=|||||*|||||||||
targets:1130   GACGGAGAUGGAGAAGGCCA   1149

2.5 PREDICTED: Oryza sativa Japonica Group carboxyvinyl-carboxyphosphonate phosphorylmutase, chloroplastic (LOC4351693), mRNA carboxyvinyl-carboxyphosphonate phosphorylmutase, chloroplastic(LOC4351693) coding protein psRNATarget