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BaseInfo

ncRNA ID	novel_zma_miR10062
Species	Zea mays
Class	miRNA
Genome position	Chr5:201833565-201833716 [-]
Reference genome	RefGen_v4
Source	SRR5099742
Length	25
Mature sequence(if miRNA)	128 - UUCCAUGCUCUACUCUGGUCCGAGA - 152
Stem-loop(if miRNA)	--                         C            U                      CAG     UA   CU   UUCCAUGCUCUACUCUGGUCCGAGA AGAGUUUUGGCG CACCUCCCUGUUGUUCUCCGGA   UACAC  UCC  G   ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||   |||||  |||   AAGGUACGAGAUGAGGCUAGGCUCU UCUUAAAGCCGU GUGGAGGGGCGACAAGAGGCCU   AUGUG  AGG  C CA                         A            C                      ---     -C   AC
Stem-loop sequence	UUCCAUGCUCUACUCUGGUCCGAGACAGAGUUUUGGCGUCACCUCCCUGUUGUUCUCCGGACAGUACACUAUCCCUGCCAGGACGUGUAUCCGGAGAACAGCGGGGAGGUGCUGCCGAAAUUCUAUCUCGGAUCGGAGUAGAGCAUGGAAAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008672589.2	ncRNA:25   AGAGC--CUGGUCUCAUCUCGUACCUU   1   *||=|--|||||||||=|||||||||= targets:1387   ACUUGACGACCAGAGUGGAGCAUGGAG   1413 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103648084 (LOC103648084), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020548683.1	ncRNA:25   AGAGC--CUGGUCUCAUCUCGUACCUU   1   *||=|--|||||||||=|||||||||= targets:1448   ACUUGACGACCAGAGUGGAGCAUGGAG   1474 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103648084 (LOC103648084), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008672590.2	ncRNA:25   AGAGC--CUGGUCUCAUCUCGUACCUU   1   *||=|--|||||||||=|||||||||= targets:1377   ACUUGACGACCAGAGUGGAGCAUGGAG   1403 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103648085 (LOC103648085), transcript variant X1, mRNA	NA	coding protein	psRNATarget