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BaseInfo

ncRNA ID	novel_zma_miR10060
Species	Zea mays
Class	miRNA
Genome position	Chr5:203781764-203781871 [-]
Reference genome	RefGen_v4
Source	SRR5099742;SRR5100255;SRR1583942
Length	22
Mature sequence(if miRNA)	87 - ACGAGAUCAAGUUGUUACCCCU - 108
Stem-loop(if miRNA)	--    -G     GUUGUUA    UC    ---------A      -  U    U  UG      ACGA  AUCAA       CCCC  UCCU          AUGCUA CC AGGA GU  UCCA   ||||  |||||       ||||  ||||          |||||| || |||| ||  |||C   UGUU  UAGUU       GGGG  AGGA          UAUGGU GG UUCU UA  AGGC GU    GG     -----AC    -U    GCUCAAGUAG      A  U    C  GU
Stem-loop sequence	ACGAGAUCAAGUUGUUACCCCUCUCCUAAUGCUACCUAGGAUGUUGUCCACCGGAUGAUCUCUUUGGAUGGUAUGAUGAACUCGAGGAUGGGGCAUUGAUGGUUGUUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001352682.1	ncRNA:22   UCCCCAUUGUUGAACUAGAGCA   1   ***||*|||||||||||||||* targets:472   UCUGGAAACAACUUGAUCUCGA   493 Target Full Sequence	2.0	Zea mays alpha/beta-Hydrolases superfamily protein (LOC100192918), transcript variant 2, mRNA	NA	coding protein	psRNATarget
BT042199.1	ncRNA:22   UCCCCAUUGUUGAACUAGAGCA   1   ***||*|||||||||||||||* targets:472   UCUGGAAACAACUUGAUCUCGA   493 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0159F02 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001138102.1	ncRNA:22   UCCCCAUUGUUGAACUAGAGCA   1   ***||*|||||||||||||||* targets:489   UCUGGAAACAACUUGAUCUCGA   510 Target Full Sequence	2.0	Zea mays alpha/beta-Hydrolases superfamily protein (LOC100192918), transcript variant 1, mRNA	NA	coding protein	psRNATarget
BT035027.1	ncRNA:22   UCCCCAUUGUUGAACUAGAGCA   1   ***||*|||||||||||||||* targets:489   UCUGGAAACAACUUGAUCUCGA   510 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0032O06 mRNA, complete cds	NA	coding protein	psRNATarget
EU959702.1	ncRNA:22   UCCCCAUUGUUGAACUAGAGCA   1   ***||*|||||||||||||||* targets:505   UCUGGAAACAACUUGAUCUCGA   526 Target Full Sequence	2.0	Zea mays clone 219457 lipase precursor, mRNA, complete cds	NA	coding protein	psRNATarget
EU961866.1	ncRNA:22   UCCCCAUUGUUGAACUAGAGCA   1   ***||*|||||||||||||||* targets:536   UCUGGAAACAACUUGAUCUCGA   557 Target Full Sequence	2.0	Zea mays clone 238743 lipase precursor, mRNA, complete cds	NA	coding protein	psRNATarget