ncRNA ID | novel_zma_miR10055 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:212575709-212575832 [+] |
Reference genome | RefGen_v4 |
Source | SRR5099742 |
Length | 21 |
Mature sequence(if miRNA) | 1 - CUUGUUUGAGAUCAAAGGUAA - 21 |
Stem-loop(if miRNA) |
--        A  U      -    GA  U        U     -AG      C     C   A   CUUGUUUG GA CAAAGG UAAU  AG GGAUUGAG GGGCU   AAUCCC UACUA UUA U   |||||||| || |||||| ||||  || |||||||| |||||   |||||| ||||| |||   GAACAAAC CU GUUUCC AUUA  UC CCUAACUC CCUGG   UUAGGG AUGAU AGU U CC        C  -      C    AC  C        -     AUA      A     A   U |
Stem-loop sequence | CUUGUUUGAGAUCAAAGGUAAUGAAGUGGAUUGAGUGGGCUAGAAUCCCCUACUACUUAAUUUUGAAUAGUAAGGGAUUAUAGGUCCCUCAAUCCCCUCAAUUACCCUUUGUCCCAAACAAGCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT018962.1 |
|
2.5 | Zea mays clone Contig296.F mRNA sequence | NA | coding protein | psRNATarget |