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BaseInfo

ncRNA ID novel_zma_miR10053
Species Zea mays
Class miRNA
Genome position Chr5:202692171-202692364 [+]
Reference genome RefGen_v4
Source SRR5099742
Length 24
Mature sequence(if miRNA) 1 - UACUUCAUUGCCUACUCUACCACU - 24
Stem-loop(if miRNA) --      A   -  UACU      C C      A             U                    CAC             C A     -----   A
  UACUUC UUG CC    CUACCA U UAUAAA UUUCAAGUUCAAA UUAUCAUAUGUUAAGAGAUA   AAAAGAGAAAAUU U AGAUA     CAC A
  |||||| ||| ||    |||||| | |||||| ||||||||||||| ||||||||||||||||||||   ||||||||||||| | |||||     |||
  AUGAAG AAC GG    GAUGGU A AUAUUU AAAGUUUAAGUUU AGUAGUAUAUAAUUUUCUAU   UUUUUUCUUUUAA A UCUAU     GUG A
AC      A   A  ---U      C C      A             C                    -AU             A C     UAAAA   A
Stem-loop sequence UACUUCAUUGCCUACUCUACCACUCUAUAAAAUUUCAAGUUCAAAUUUAUCAUAUGUUAAGAGAUACACAAAAGAGAAAAUUCUAAGAUACACAAAAGUGAAAAUUAUCUCAAAAUUUUCUUUUUUUAUAUCUUUUAAUAUAUGAUGACUUUGAAUUUGAAAAUUUAUACACUGGUAGUGGACAAAGAAGUACA