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BaseInfo

ncRNA ID	novel_zma_miR10036
Species	Zea mays
Class	miRNA
Genome position	Chr5:71379727-71379870 [+]
Reference genome	RefGen_v4
Source	SRR1997865
Length	24
Mature sequence(if miRNA)	121 - GUGCACCAUCGGACUGUCUGGUGU - 144
Stem-loop(if miRNA)	--       U    A   U A         U  C  G     AAAA     CG     AAC    ACC     U   ACCGGAC GUCC GUG G GCACCAGAC GU CG UGUGG    GUCUG  GCGCC   GGUC   UGCUC G   ||||||| |||| ||| | ||||||||| || || |||||    |||||  |||||   ||||   ||||| A   UGGUCUG CAGG UAC C CGUGGUCUG CG GU ACAUC    CAGGC  CGCGG   UCGG   ACGAG U UG       U    C   - A         U  C  G     -GGA     CA     --A    -CA     A
Stem-loop sequence	ACCGGACUGUCCAGUGUGAGCACCAGACUGUCCGGUGUGGAAAAGUCUGCGGCGCCAACGGUCACCUGCUCUGAUAGAGCAACGGCUAGGCGCACCGGACAGGCUACAGUGCGCUGUCUGGUGCACCAUCGGACUGUCUGGUGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU947920.1	ncRNA:24   UGUGGUCUGUCAGGCUACCACGUG   1   =||||||||*|||||=|||||||| targets:202   GCACCAGACUGUCCGGUGGUGCAC   225 Target Full Sequence	2.5	Zea mays clone 366338 mRNA sequence	NA	coding protein	psRNATarget
NM_001175661.1	ncRNA:24   UGUGGUCUGUCAGGCUACCACGUG   1   *||||=|||*|||||||||||||| targets:1065   UCACCGGACUGUCCGAUGGUGCAC   1088 Target Full Sequence	2.0	Zea mays uncharacterized LOC100382977 (LOC100382977), mRNA	NA	coding protein	psRNATarget
BT065862.1	ncRNA:24   UGUGGUCUGUCAGGCUACCACGUG   1   *||||=|||*|||||||||||||| targets:1065   UCACCGGACUGUCCGAUGGUGCAC   1088 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFc0155J05 mRNA, complete cds	NA	coding protein	psRNATarget