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BaseInfo

ncRNA ID	ath-miRf10108-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - UGCAGUGCAUAUUUGGCUGCA - NA
Stem-loop(if miRNA)	G  CUACAG      AA        UCC    C  --AA       C ---A   AAUAUAUCCUUGAAAAUGA UAUGCAUGCAG CA      GCACUG  AAUGUUGC   GGAA AU    UGUAGCU C    GGA                   A ||||||||||| ||      ||||||  ||||||||   |||| ||    ||||||| |    |||                   G GUAUGUACGUC GU      CGUGAC  UUACAACG   CCUU UG    ACGUCGA G    CUU                   C            G  -UUAUA      -G        --U    U  AUAA       C CUAU   GCUGUCUUUGGUCUGUACU
Stem-loop sequence	UAUGCAUGCAGGCACUACAGGCACUGAAAAUGUUGCUCCGGAACAUAAUGUAGCUCCAGGAAAUAUAUCCUUGAAAAUGAAGCUCAUGUCUGGUUUCUGUCGUUCUAUCGCAGCUGCAAAUAGUUUUCCUGCAACAUUGCAGUGCAUAUUUGGCUGCAUGUAUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT029465.1	ncRNA:21   ACGUCGGUUUAUACGUGACGU   1   ||||||||*|||||||||||| targets:267   UGCAGCCAUAUAUGCACUGCA   287 Target Full Sequence	1.5	Arabidopsis thaliana At5g65000 mRNA, complete cds	NA	coding protein	psRNATarget
BT030009.1	ncRNA:21   ACGUCGGUUUAUACGUGACGU   1   ||||||||*|||||||||||| targets:267   UGCAGCCAUAUAUGCACUGCA   287 Target Full Sequence	1.5	Arabidopsis thaliana At5g65000 mRNA, complete cds	NA	coding protein	psRNATarget
BX833968.1	ncRNA:21   ACGUCGGUUUAUACGUGACGU   1   ||||||||*|||||||||||| targets:307   UGCAGCCAUAUAUGCACUGCA   327 Target Full Sequence	1.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL87ZC05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
AK226979.1	ncRNA:21   ACGUCGGUUUAUACGUGACGU   1   ||||||||*|||||||||||| targets:316   UGCAGCCAUAUAUGCACUGCA   336 Target Full Sequence	1.5	Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL09-39-L01	NA	coding protein	psRNATarget
AY072020.1	ncRNA:21   ACGUCGGUUUAUACGUGACGU   1   ||||||||*|||||||||||| targets:339   UGCAGCCAUAUAUGCACUGCA   359 Target Full Sequence	1.5	Arabidopsis thaliana AT5g65000/MXK3_23 mRNA, complete cds	NA	coding protein	psRNATarget
AY085268.1	ncRNA:21   ACGUCGGUUUAUACGUGACGU   1   ||||||||*|||||||||||| targets:353   UGCAGCCAUAUAUGCACUGCA   373 Target Full Sequence	1.5	Arabidopsis thaliana clone 142216 mRNA, complete sequence	NA	coding protein	psRNATarget
BX829805.1	ncRNA:21   ACGUCGGUUUAUACGUGACGU   1   ||||||||*|||||||||||| targets:335   UGCAGCCAUAUAUGCACUGCA   355 Target Full Sequence	1.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB38ZE02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
NM_125899.4	ncRNA:21   ACGUCGGUUUAUACGUGACGU   1   ||||||||*|||||||||||| targets:409   UGCAGCCAUAUAUGCACUGCA   429 Target Full Sequence	1.5	Arabidopsis thaliana Nucleotide-sugar transporter family protein mRNA	Nucleotide-sugar transporter family protein(AT5G65000)	coding protein	psRNATarget
NM_203266.2	ncRNA:21   ACGUCGGUUUAUACGUGACGU   1   ||||||||*|||||||||||| targets:353   UGCAGCCAUAUAUGCACUGCA   373 Target Full Sequence	1.5	Arabidopsis thaliana Nucleotide-sugar transporter family protein mRNA	Nucleotide-sugar transporter family protein(AT5G65000)	coding protein	psRNATarget