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BaseInfo

ncRNA ID novel_zma_miR10014
Species Zea mays
Class miRNA
Genome position Chr4:96152464-96152553 [-]
Reference genome RefGen_v4
Source SRR5099742;SRR5100248
Length 21
Mature sequence(if miRNA) 1 - UGAAAGAAAGCGGCAAAAGAC - 21
Stem-loop(if miRNA) --CA      -   G  A      C    U      UUUAU  UCU
    UUUGUU CUU UC UUCAAA GAUA GAUUUC     GU   U
    |||||| ||| || |||||| |||| ||||||     ||   A
    AAACGG GAA AG AAGUUU UUGU UUAGAG     CG   U
CAGA      C   -  A      U    -      UCCCU  UAC
Stem-loop sequence CAUUUGUUCUUGUCAUUCAAACGAUAUGAUUUCUUUAUGUUCUUAUCAUGCUCCCUGAGAUUUGUUUUUUGAAAGAAAGCGGCAAAAGAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020548157.1
ncRNA:21   CAGAAAACGGCGAAAGAAAGU   1
  ||||||||||||||*||||||
targets:3986   GUCUUUUGCCGCUUCCUUUCA   4006

1.5 PREDICTED: Zea mays GPCR-type G protein COLD1 (LOC103645985), transcript variant X5, mRNA NA coding protein psRNATarget
XM_020548154.1
ncRNA:21   CAGAAAACGGCGAAAGAAAGU   1
  ||||||||||||||*||||||
targets:6576   GUCUUUUGCCGCUUCCUUUCA   6596

1.5 PREDICTED: Zea mays GPCR-type G protein COLD1 (LOC103645985), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020548153.1
ncRNA:21   CAGAAAACGGCGAAAGAAAGU   1
  ||||||||||||||*||||||
targets:6576   GUCUUUUGCCGCUUCCUUUCA   6596

1.5 PREDICTED: Zea mays GPCR-type G protein COLD1 (LOC103645985), transcript variant X1, mRNA NA coding protein psRNATarget