ncRNA ID | novel_zma_miR10014 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:96152464-96152553 [-] |
Reference genome | RefGen_v4 |
Source | SRR5099742;SRR5100248 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UGAAAGAAAGCGGCAAAAGAC - 21 |
Stem-loop(if miRNA) |
--CA      -   G  A      C    U      UUUAU  UCU     UUUGUU CUU UC UUCAAA GAUA GAUUUC     GU   U     |||||| ||| || |||||| |||| ||||||     ||   A     AAACGG GAA AG AAGUUU UUGU UUAGAG     CG   U CAGA      C   -  A      U    -      UCCCU  UAC |
Stem-loop sequence | CAUUUGUUCUUGUCAUUCAAACGAUAUGAUUUCUUUAUGUUCUUAUCAUGCUCCCUGAGAUUUGUUUUUUGAAAGAAAGCGGCAAAAGAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020548157.1 |
|
1.5 | PREDICTED: Zea mays GPCR-type G protein COLD1 (LOC103645985), transcript variant X5, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_020548154.1 |
|
1.5 | PREDICTED: Zea mays GPCR-type G protein COLD1 (LOC103645985), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_020548153.1 |
|
1.5 | PREDICTED: Zea mays GPCR-type G protein COLD1 (LOC103645985), transcript variant X1, mRNA | NA | coding protein | psRNATarget |