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BaseInfo

ncRNA ID novel_zma_miR10004
Species Zea mays
Class miRNA
Genome position Chr4:157158908-157158962 [-]
Reference genome RefGen_v4
Source SRR5099742
Length 24
Mature sequence(if miRNA) 1 - UUAUUUUCGUCGGCCACCGCAGAG - 24
Stem-loop(if miRNA) --CA                    CCU
    GUGGUGGCCGACGAAAAUAG   A
    ||||||||||||||||||||   G
    CGCCACCGGCUGCUUUUAUU   G
GAGA                    CAA
Stem-loop sequence CAGUGGUGGCCGACGAAAAUAGCCUAGGAACUUAUUUUCGUCGGCCACCGCAGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT042581.1
ncRNA:24   GAGACGCCACCGGCUGCUUUUAUU   1
  *|=|*||**|||||||||||||||
targets:482   AUUUUCGUAGGCCGACGAAAAUAA   505

2.0 Zea mays full-length cDNA clone ZM_BFb0345H15 mRNA, complete cds NA coding protein psRNATarget