ncRNA ID | novel_zma_miR10002 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:28562556-28562648 [+] |
Reference genome | RefGen_v4 |
Source | SRR5099742;SRR5100255 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UCUGGCUGUAUAGAGAAUCUGAGU - 24 |
Stem-loop(if miRNA) |
--    --   G      GAA       A   UUA    U  --GUG GG   UCUG  GCU UAUAGA   UCUGAGU UCU   GGAU AC     C  A   ||||  ||| ||||||   ||||||| |||   |||| ||     |  G   AGGC  UGA AUAUCU   GGACUCG GGG   CCUG UG     G  G UU    AG   A      --A       -   -UA    U  AAAUA AA |
Stem-loop sequence | UCUGGCUGUAUAGAGAAUCUGAGUAUCUUUAGGAUUACGUGCGGAGGAAGAUAAAGUUGUCCAUGGGGCUCAGGAUCUAUAAAGUGACGGAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008660983.2 |
|
2.5 | PREDICTED: Zea mays deSI-like protein At4g17486 (LOC100501775), mRNA | NA | coding protein | psRNATarget |