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BaseInfo

ncRNA ID novel_zma_miR10002
Species Zea mays
Class miRNA
Genome position Chr4:28562556-28562648 [+]
Reference genome RefGen_v4
Source SRR5099742;SRR5100255
Length 24
Mature sequence(if miRNA) 1 - UCUGGCUGUAUAGAGAAUCUGAGU - 24
Stem-loop(if miRNA) --    --   G      GAA       A   UUA    U  --GUG GG
  UCUG  GCU UAUAGA   UCUGAGU UCU   GGAU AC     C  A
  ||||  ||| ||||||   ||||||| |||   |||| ||     |  G
  AGGC  UGA AUAUCU   GGACUCG GGG   CCUG UG     G  G
UU    AG   A      --A       -   -UA    U  AAAUA AA
Stem-loop sequence UCUGGCUGUAUAGAGAAUCUGAGUAUCUUUAGGAUUACGUGCGGAGGAAGAUAAAGUUGUCCAUGGGGCUCAGGAUCUAUAAAGUGACGGAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008660983.2
ncRNA:24   UGAGUCUAAGAGAUAUGUCGGUCU   1
  |||=|||||*||||||||*|||||
targets:74   ACUUAGAUUAUCUAUACAACCAGA   97

2.5 PREDICTED: Zea mays deSI-like protein At4g17486 (LOC100501775), mRNA NA coding protein psRNATarget