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BaseInfo

ncRNA ID novel_zma_miR9992
Species Zea mays
Class miRNA
Genome position Chr4:23861613-23861691 [+]
Reference genome RefGen_v4
Source SRR5099742;SRR5100248
Length 22
Mature sequence(if miRNA) 1 - UUCUUUUGCUUCUGGAUGGUAA - 22
Stem-loop(if miRNA) --U          ---CU     --  AACAUGGCACAUCCU
   UCUUUUGCUU     GGAUG  GU               G
   ||||||||||     |||||  ||
   AGAAAACGAA     CACCA  CU               G
CUU          UAAGA     CU  UGUUUCCAGUAUGGU
Stem-loop sequence UUCUUUUGCUUCUGGAUGGUAACAUGGCACAUCCUGGUGGUAUGACCUUUGUUCUCACCACAGAAUAAGCAAAAGAUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ064344.1
ncRNA:22   AAUGGUAGGUCUUCGUUUUCUU   1
  ***||*|||||||||=||||||
targets:125   CCUCCCUCCAGAAGCGAAAGAA   146

2.5 TSA: Zea mays contig65468, mRNA sequence NA coding protein psRNATarget