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BaseInfo

ncRNA ID novel_zma_miR9989
Species Zea mays
Class miRNA
Genome position Chr10:1980440-1980540 [-]
Reference genome RefGen_v4
Source SRR5099742
Length 20
Mature sequence(if miRNA) 1 - UCUAAAGUUUGGAGGAGGGG - 20
Stem-loop(if miRNA) --                U         --     C  AUAAA      -A  A
  UCUCCUCUAAGCUUUA AGCUCUAAA  CUUUA AG     GCUUUA  AC A
  |||||||||||||||| |||||||||  ||||| ||     ||||||  ||
  GGAGGAGGUUUGAAAU UCGAGAUUU  GAAAU UC     UGAAAU  UG G
GG                C         UC     C  ----G      CG  U
Stem-loop sequence UCUCCUCUAAGCUUUAUAGCUCUAAACUUUACAGAUAAAGCUUUAAACAAGUGUGCUAAAGUGCUCUAAAGCUUUUAGAGCUCUAAAGUUUGGAGGAGGGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU955582.1
ncRNA:20   GGGGAGGAGGUUUGAAAUCU   1
  ==|||||||||=||||||||
targets:22   UUCCUCCUCCAGACUUUAGA   41

2.5 Zea mays clone 1537950 hypothetical protein mRNA, complete cds NA coding protein psRNATarget