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BaseInfo

ncRNA ID novel_zma_miR9986
Species Zea mays
Class miRNA
Genome position Chr4:194704134-194704218 [+]
Reference genome RefGen_v4
Source SRR5099742
Length 24
Mature sequence(if miRNA) 1 - GCCGAGUGCUAUGACCUGGACACU - 24
Stem-loop(if miRNA) --  CG    C        G      C         A  AUA
  GC  AGUG UAUGACCU GACACU GGCAAAGUA CU   A
  ||  |||| |||||||| |||||| ||||||||| ||   C
  CG  UCAC AUACUGGA UUGUGA CCGUUUCAU GA   A
AA  AU    A        A      A         G  GAA
Stem-loop sequence GCCGAGUGCUAUGACCUGGACACUCGGCAAAGUAACUAUAACAAAGAGGUACUUUGCCAAGUGUUAAGGUCAUAACACUUAGCAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI406144.1
ncRNA:24   UCACAGGUCCAGUAUCGUGAGCCG   1
  ||||||*|||*|||||||||||||
targets:3   AGUGUCAAGGCCAUAGCACUCGGC   26

2.0 Sequence 4269 from Patent EP2074227 NA coding protein psRNATarget
JB166605.1
ncRNA:24   UCACAGGUCCAGUAUCGUGAGCCG   1
  ||||||*|||*|||||||||||||
targets:3   AGUGUCAAGGCCAUAGCACUCGGC   26

2.0 Sequence 4269 from Patent EP2559767 NA coding protein psRNATarget
LQ238274.1
ncRNA:24   UCACAGGUCCAGUAUCGUGAGCCG   1
  ||||||*|||*|||||||||||||
targets:3   AGUGUCAAGGCCAUAGCACUCGGC   26

2.0 Sequence 4269 from Patent EP2985353 NA coding protein psRNATarget