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BaseInfo

ncRNA ID	novel_zma_miR9980
Species	Zea mays
Class	miRNA
Genome position	Chr10:15300908-15300971 [-]
Reference genome	RefGen_v4
Source	SRR5099742
Length	24
Mature sequence(if miRNA)	1 - AUUCUUUGUCGAGUGCCAGAUCGC - 24
Stem-loop(if miRNA)	--                    UUU      A   GAUUUGGCACUCGGCAAAGA   UUUUAA A   ||||||||||||||||||||   ||||||   CUAGACCGUGAGCUGUUUCU   AAAAUU U CG                    UAU      U
Stem-loop sequence	GAUUUGGCACUCGGCAAAGAUUUUUUUAAAAUUUUAAAAUAUUCUUUGUCGAGUGCCAGAUCGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ067174.1	ncRNA:24   CGCUAGACCGUGAGCUGUUUCUUA   1   |=|=*||||||||||=|||||||* targets:14   GUGGACUGGCACUCGGCAAAGAAC   37 Target Full Sequence	2.5	TSA: Zea mays contig02808, mRNA sequence	NA	coding protein	psRNATarget
XM_008658185.2	ncRNA:24   CGCUAGACCGUGAGCUGUUUCUUA   1   *=*|||*||||||||||||||||| targets:1603   UUUAUCGGGCACUCGACAAAGAAU   1626 Target Full Sequence	1.0	PREDICTED: Zea mays putative F-box/LRR-repeat protein At3g58880 (LOC103635804), mRNA	NA	coding protein	psRNATarget
LQ239092.1	ncRNA:24   CGCUAGACCGUGAGCUGUUUCUUA   1   ||--|||||||||||=|||||||* targets:202   GC--UCUGGCACUCGGCAAAGAAG   223 Target Full Sequence	2.5	Sequence 5087 from Patent EP2985353	NA	coding protein	psRNATarget
JB167423.1	ncRNA:24   CGCUAGACCGUGAGCUGUUUCUUA   1   ||--|||||||||||=|||||||* targets:202   GC--UCUGGCACUCGGCAAAGAAG   223 Target Full Sequence	2.5	Sequence 5087 from Patent EP2559767	NA	coding protein	psRNATarget
HI406962.1	ncRNA:24   CGCUAGACCGUGAGCUGUUUCUUA   1   ||--|||||||||||=|||||||* targets:202   GC--UCUGGCACUCGGCAAAGAAG   223 Target Full Sequence	2.5	Sequence 5087 from Patent EP2074227	NA	coding protein	psRNATarget
HI406725.1	ncRNA:24   CGCUAGACCGUGAGCUGUUUCUUA   1   |=|=-|||*|||||||||||||*| targets:99   GUGG-CUGACACUCGACAAAGAUU   121 Target Full Sequence	2.5	Sequence 4850 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238855.1	ncRNA:24   CGCUAGACCGUGAGCUGUUUCUUA   1   |=|=-|||*|||||||||||||*| targets:99   GUGG-CUGACACUCGACAAAGAUU   121 Target Full Sequence	2.5	Sequence 4850 from Patent EP2985353	NA	coding protein	psRNATarget
JB167186.1	ncRNA:24   CGCUAGACCGUGAGCUGUUUCUUA   1   |=|=-|||*|||||||||||||*| targets:99   GUGG-CUGACACUCGACAAAGAUU   121 Target Full Sequence	2.5	Sequence 4850 from Patent EP2559767	NA	coding protein	psRNATarget