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BaseInfo

ncRNA ID novel_zma_miR9974
Species Zea mays
Class miRNA
Genome position Chr3:49266920-49267099 [+]
Reference genome RefGen_v4
Source SRR5099742
Length 23
Mature sequence(if miRNA) 158 - AAAGAAAACCGCUGUAGAAACAU - 180
Stem-loop(if miRNA) --     C   UA      -   A    AA         C CGC        UUUC         -C    A      A    UA   A   AU
  GUUUC ACA  CGGUUU CUU AGCA  CUGCCAGUG G   UAAUGUUA    UACUGGCGG  UGCU AAGAAA CCGC  GUG AAA  C
  ||||| |||  |||||| ||| ||||  ||||||||| |   ||||||||    |||||||||  |||| |||||| ||||  ||| |||
  CAAAG UGU  GCCAAA GAA UCGU  GGCGGUCAC C   AUUGUAAU    GUGACCGCC  ACGA UUCUUU GGCG  CAC UUU  A
UA     A   -C      A   A    CG         - UUU        ---C         AA    A      -    UA   C   GU
Stem-loop sequence GUUUCCACAUACGGUUUCUUAAGCAAACUGCCAGUGCGCGCUAAUGUUAUUUCUACUGGCGGCUGCUAAAGAAAACCGCUAGUGAAAAAUCAUGUUUCCACAUGCGGUUUCUUAAGCAAACCGCCAGUGCUAAUGUUAUUUCCACUGGCGGGCUGCUAAAGAAAACCGCUGUAGAAACAU