ncRNA ID | novel_zma_miR9974 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:49266920-49267099 [+] |
Reference genome | RefGen_v4 |
Source | SRR5099742 |
Length | 23 |
Mature sequence(if miRNA) | 158 - AAAGAAAACCGCUGUAGAAACAU - 180 |
Stem-loop(if miRNA) |
--     C   UA      -   A    AA         C CGC        UUUC         -C    A      A    UA   A   AU   GUUUC ACA  CGGUUU CUU AGCA  CUGCCAGUG G   UAAUGUUA    UACUGGCGG  UGCU AAGAAA CCGC  GUG AAA  C   ||||| |||  |||||| ||| ||||  ||||||||| |   ||||||||    |||||||||  |||| |||||| ||||  ||| |||   CAAAG UGU  GCCAAA GAA UCGU  GGCGGUCAC C   AUUGUAAU    GUGACCGCC  ACGA UUCUUU GGCG  CAC UUU  A UA     A   -C      A   A    CG         - UUU        ---C         AA    A      -    UA   C   GU |
Stem-loop sequence | GUUUCCACAUACGGUUUCUUAAGCAAACUGCCAGUGCGCGCUAAUGUUAUUUCUACUGGCGGCUGCUAAAGAAAACCGCUAGUGAAAAAUCAUGUUUCCACAUGCGGUUUCUUAAGCAAACCGCCAGUGCUAAUGUUAUUUCCACUGGCGGGCUGCUAAAGAAAACCGCUGUAGAAACAU |