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BaseInfo

ncRNA ID novel_zma_miR9973
Species Zea mays
Class miRNA
Genome position Chr3:48358448-48358652 [+]
Reference genome RefGen_v4
Source SRR5099742;SRR5100255
Length 23
Mature sequence(if miRNA) 1 - CGAGGGAAUAAUGUUUCAUGGAC - 23
Stem-loop(if miRNA) --C       -         -AU           G     AU      --C                                                    U
   GAGGGAA UAAUGUUUC   GGACGAAGGAC UUGAC  UUAACA   UUUAUGUUGCCUUGUUCUUAAUUCAUAGCACUUGAGAACGAGUCCCCAACAU G
   ||||||| |||||||||   ||||||||||| |||||  ||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||| G
   UUCCCUU AUUACGAAG   CCUGCUUCCUG AAUUG  AAUUGU   AGAUACAACGGAACAAGAAUUGAGUAUCGUGAACUCUUGUUCAGGGGUUGUA C
GGA       U         CCU           G     CU      AAA                                                    A
Stem-loop sequence CGAGGGAAUAAUGUUUCAUGGACGAAGGACGUUGACAUUUAACACUUUAUGUUGCCUUGUUCUUAAUUCAUAGCACUUGAGAACGAGUCCCCAACAUUGGCAAUGUUGGGGACUUGUUCUCAAGUGCUAUGAGUUAAGAACAAGGCAACAUAGAAAAUGUUAAUCGUUAAGGUCCUUCGUCCUCCGAAGCAUUAUUUCCCUUAGG