ncRNA ID | novel_zma_miR9973 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:48358448-48358652 [+] |
Reference genome | RefGen_v4 |
Source | SRR5099742;SRR5100255 |
Length | 23 |
Mature sequence(if miRNA) | 1 - CGAGGGAAUAAUGUUUCAUGGAC - 23 |
Stem-loop(if miRNA) |
--C       -         -AU           G     AU      --C                                                    U    GAGGGAA UAAUGUUUC   GGACGAAGGAC UUGAC  UUAACA   UUUAUGUUGCCUUGUUCUUAAUUCAUAGCACUUGAGAACGAGUCCCCAACAU G    ||||||| |||||||||   ||||||||||| |||||  ||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||| G    UUCCCUU AUUACGAAG   CCUGCUUCCUG AAUUG  AAUUGU   AGAUACAACGGAACAAGAAUUGAGUAUCGUGAACUCUUGUUCAGGGGUUGUA C GGA       U         CCU           G     CU      AAA                                                    A |
Stem-loop sequence | CGAGGGAAUAAUGUUUCAUGGACGAAGGACGUUGACAUUUAACACUUUAUGUUGCCUUGUUCUUAAUUCAUAGCACUUGAGAACGAGUCCCCAACAUUGGCAAUGUUGGGGACUUGUUCUCAAGUGCUAUGAGUUAAGAACAAGGCAACAUAGAAAAUGUUAAUCGUUAAGGUCCUUCGUCCUCCGAAGCAUUAUUUCCCUUAGG |