ncRNA ID | novel_zma_miR9971 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:18635298-18635383 [-] |
Reference genome | RefGen_v4 |
Source | SRR5099742 |
Length | 21 |
Mature sequence(if miRNA) | 66 - UUCAAACUAUUGUGUUGGACU - 86 |
Stem-loop(if miRNA) |
-UUCAAAC        U       -U  -AU   CU    U  U         UAUUGUGU GGACUAU  AU   GAU  CAAC CA U         |||||||| |||||||  ||   |||  |||| ||         GUAACGUA UCUGGUA  UA   CUA  GUUG GU G GUGUGUUC        -       UC  GUU   CU    U  U |
Stem-loop sequence | UUCAAACUAUUGUGUUGGACUAUUAUAUGAUCUCAACUCAUUGUUGUGUUGUCAUCUUGAUCUAUGGUCUAUGCAAUGCUUGUGUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AY105194.1 |
|
2.5 | Zea mays PCO076640 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
XM_020546274.1 |
|
3.0 | PREDICTED: Zea mays probable leucine-rich repeat receptor-like protein kinase At1g35710 (LOC109943344), mRNA | NA | coding protein | psRNATarget |