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BaseInfo

ncRNA ID novel_zma_miR9968
Species Zea mays
Class miRNA
Genome position Chr3:56887334-56887548 [-]
Reference genome RefGen_v4
Source SRR5099742
Length 27
Mature sequence(if miRNA) 189 - CAAGCAGUCCUUUUUUGCAAGCGUGCA - 215
Stem-loop(if miRNA) --     A                       G            A        CG               GUCACA    ACACUUAAACCCUUCCACCACCAGCUCAAU
  CAAGC GUCCUUUUUUGCAAGCGUGCAAG AAAUCAUCUGGU CAUUAGAU  UGAUCCAACCGUAGA      UUUA                              A
  ||||| ||||||||||||||||||||||| |||||||||||| ||||||||  |||||||||||||||      ||||
  GUUCG CAGGAAGAAACGUUCGCACGUUC UUUAGUAGACCA GUAAUCUA  GCUAGGUUGGUGUCU      UGUU                              A
AC     G                       A            G        AU               -----A    AGUACCAAACAAUCCCCAAAAAAUAUUUCU
Stem-loop sequence CAAGCAGUCCUUUUUUGCAAGCGUGCAAGGAAAUCAUCUGGUACAUUAGAUCGUGAUCCAACCGUAGAGUCACAUUUAACACUUAAACCCUUCCACCACCAGCUCAAUAAUCUUUAUAAAAAACCCCUAACAAACCAUGAUUGUAUCUGUGGUUGGAUCGUAAUCUAAUGGACCAGAUGAUUUACUUGCACGCUUGCAAAGAAGGACGGCUUGCA