ncRNA ID | novel_zma_miR9968 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:56887334-56887548 [-] |
Reference genome | RefGen_v4 |
Source | SRR5099742 |
Length | 27 |
Mature sequence(if miRNA) | 189 - CAAGCAGUCCUUUUUUGCAAGCGUGCA - 215 |
Stem-loop(if miRNA) |
--     A                       G            A        CG               GUCACA    ACACUUAAACCCUUCCACCACCAGCUCAAU   CAAGC GUCCUUUUUUGCAAGCGUGCAAG AAAUCAUCUGGU CAUUAGAU  UGAUCCAACCGUAGA      UUUA                              A   ||||| ||||||||||||||||||||||| |||||||||||| ||||||||  |||||||||||||||      ||||   GUUCG CAGGAAGAAACGUUCGCACGUUC UUUAGUAGACCA GUAAUCUA  GCUAGGUUGGUGUCU      UGUU                              A AC     G                       A            G        AU               -----A    AGUACCAAACAAUCCCCAAAAAAUAUUUCU |
Stem-loop sequence | CAAGCAGUCCUUUUUUGCAAGCGUGCAAGGAAAUCAUCUGGUACAUUAGAUCGUGAUCCAACCGUAGAGUCACAUUUAACACUUAAACCCUUCCACCACCAGCUCAAUAAUCUUUAUAAAAAACCCCUAACAAACCAUGAUUGUAUCUGUGGUUGGAUCGUAAUCUAAUGGACCAGAUGAUUUACUUGCACGCUUGCAAAGAAGGACGGCUUGCA |