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BaseInfo

ncRNA ID	novel_zma_miR9961
Species	Zea mays
Class	miRNA
Genome position	Chr5:17853172-17853234 [-]
Reference genome	RefGen_v4
Source	SRR1997865
Length	24
Mature sequence(if miRNA)	40 - GAGGAUUGGAGGGAUUGAGGGGGA - 63
Stem-loop(if miRNA)	--             -              UA   GAGGAUUGGAGGG AUUGAGGGGGAAAU  G   ||||||||||||| ||||||||||||||   CUCCUAACCUCCC UAACUCCCCCUUUA  U CC             C              UU
Stem-loop sequence	GAGGAUUGGAGGGAUUGAGGGGGAAAUUAGUUUAUUUCCCCCUCAAUCCCCUCCAAUCCUCCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ235623.1	ncRNA:24   AGGGGGAGUUAGGG-AGGUUAGGAG   1   ||||||||||||||-|||||||||| targets:32   UCCCCCUCAAUCCCCUCCAAUCCUC   56 Target Full Sequence	3.0	Sequence 1618 from Patent EP2985353	NA	coding protein	psRNATarget
JB163954.1	ncRNA:24   AGGGGGAGUUAGGG-AGGUUAGGAG   1   ||||||||||||||-|||||||||| targets:32   UCCCCCUCAAUCCCCUCCAAUCCUC   56 Target Full Sequence	3.0	Sequence 1618 from Patent EP2559767	NA	coding protein	psRNATarget
HI403493.1	ncRNA:24   AGGGGGAGUUAGGG-AGGUUAGGAG   1   ||||||||||||||-|||||||||| targets:32   UCCCCCUCAAUCCCCUCCAAUCCUC   56 Target Full Sequence	3.0	Sequence 1618 from Patent EP2074227	NA	coding protein	psRNATarget
BT088155.1	ncRNA:24   AGGGGGAGUUAGGG-AGGUUAGGAG   1   ||=|=|||||||||-|||||||||| targets:1463   UCUCUCUCAAUCCCCUCCAAUCCUC   1487 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFc0038D09 mRNA, complete cds	NA	coding protein	psRNATarget
EZ055746.1	ncRNA:24   AGGGGGAGUUAGGG-AGGUUAGGAG   1   |=|*||||||||||-|||||||||| targets:75   UUCACCUCAAUCCCCUCCAAUCCUC   99 Target Full Sequence	3.0	TSA: Zea mays contig56868, mRNA sequence	NA	coding protein	psRNATarget
AY110351.1	ncRNA:24   AGGGGGAGUUAGGG-AGGUUAGGAG   1   |=|*||||||||||-|||||||||| targets:41   UUCACCUCAAUCCCCUCCAAUCCUC   65 Target Full Sequence	3.0	Zea mays CL33021_1 mRNA sequence	NA	coding protein	psRNATarget
EZ106495.1	ncRNA:24   AGGGGGAGUUAGGGAGGUUAGGAG   1   |=*=||||||||=||||||||||= targets:92   UUAUCCUCAAUCUCUCCAAUCCUU   115 Target Full Sequence	2.5	TSA: Zea mays contig42153, mRNA sequence	NA	coding protein	psRNATarget