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BaseInfo

ncRNA ID novel_zma_miR9957
Species Zea mays
Class miRNA
Genome position Chr3:31692218-31692320 [+]
Reference genome RefGen_v4
Source SRR5099742
Length 23
Mature sequence(if miRNA) 81 - UAAAGUUAGGAUCUCGGCAAAGA - 103
Stem-loop(if miRNA) --         U   G  UU             CUUUUGUCG              A
  UUUGCCGAG GUU UA  CUUUGCCGAGUGC         GGCACUCGGCAAAG A
  ||||||||| ||| ||  |||||||||||||         ||||||||||||||
  AAACGGCUC UAG AU  GAAAUGGCUCACG         CCGUGAGCCGUUUC G
AG         -   G  -U             ---------              G
Stem-loop sequence UUUGCCGAGUGUUGUAUUCUUUGCCGAGUGCCUUUUGUCGGGCACUCGGCAAAGAAGGCUUUGCCGAGUGCCGCACUCGGUAAAGUUAGGAUCUCGGCAAAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB166323.1
ncRNA:23   AGAAACGGCUCUAGGAUUGAAAU   1
  ||||||||||||||||||||||=
targets:150   UCUUUGCCGAGAUCCUAACUUUG   172

1.0 Sequence 3987 from Patent EP2559767 NA coding protein psRNATarget
HI405862.1
ncRNA:23   AGAAACGGCUCUAGGAUUGAAAU   1
  ||||||||||||||||||||||=
targets:150   UCUUUGCCGAGAUCCUAACUUUG   172

1.0 Sequence 3987 from Patent EP2074227 NA coding protein psRNATarget
LQ237992.1
ncRNA:23   AGAAACGGCUCUAGGAUUGAAAU   1
  ||||||||||||||||||||||=
targets:150   UCUUUGCCGAGAUCCUAACUUUG   172

1.0 Sequence 3987 from Patent EP2985353 NA coding protein psRNATarget