ncRNA ID | novel_zma_miR9953 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:157137742-157137841 [-] |
Reference genome | RefGen_v4 |
Source | SRR5099742 |
Length | 21 |
Mature sequence(if miRNA) | 80 - CAGUUCACCCAAAGUUUACCC - 100 |
Stem-loop(if miRNA) |
--     C     A G  -        AG  CUG   UG A        UG   CAGUU ACCCA A UU UACCCAUA  UA   UUC  C UUGUAGAC  C   ||||| ||||| | || ||||||||  ||   |||  | ||||||||   GUCGA UGGGU U AG AUGGGUAU  GU   GAG  G GACGUUUG  A UC     A     A G  U        AA  -UU   GU A        UC |
Stem-loop sequence | CAGUUCACCCAAAGUUUACCCAUAAGUACUGUUCUGCAUUGUAGACUGCACUGUUUGCAGAGUGGAGUUUGAAUAUGGGUAUGAGUAUGGGUAAGCUGCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008666620.2 |
|
2.0 | PREDICTED: Zea mays hypothetical protein (LOC103643438), mRNA | NA | coding protein | psRNATarget |