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BaseInfo

ncRNA ID novel_zma_miR9953
Species Zea mays
Class miRNA
Genome position Chr3:157137742-157137841 [-]
Reference genome RefGen_v4
Source SRR5099742
Length 21
Mature sequence(if miRNA) 80 - CAGUUCACCCAAAGUUUACCC - 100
Stem-loop(if miRNA) --     C     A G  -        AG  CUG   UG A        UG
  CAGUU ACCCA A UU UACCCAUA  UA   UUC  C UUGUAGAC  C
  ||||| ||||| | || ||||||||  ||   |||  | ||||||||
  GUCGA UGGGU U AG AUGGGUAU  GU   GAG  G GACGUUUG  A
UC     A     A G  U        AA  -UU   GU A        UC
Stem-loop sequence CAGUUCACCCAAAGUUUACCCAUAAGUACUGUUCUGCAUUGUAGACUGCACUGUUUGCAGAGUGGAGUUUGAAUAUGGGUAUGAGUAUGGGUAAGCUGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008666620.2
ncRNA:21   CCCAUUUGAAACCCACUUGAC   1
  *|*|||||||||||||||||*
targets:53   UGAUAAACUUUGGGUGAACUC   73

2.0 PREDICTED: Zea mays hypothetical protein (LOC103643438), mRNA NA coding protein psRNATarget