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BaseInfo

ncRNA ID novel_zma_miR9938
Species Zea mays
Class miRNA
Genome position Chr3:23713582-23713665 [+]
Reference genome RefGen_v4
Source SRR5099742
Length 24
Mature sequence(if miRNA) 61 - UAUGAUUAUACCCUUCUCUCACCU - 84
Stem-loop(if miRNA) --          A         A        C     AUAAU
  GUGAGGGAAG GUAUAAUCA AAUUAACC UAAAA     G
  |||||||||| ||||||||| |||||||| |||||
  CACUCUCUUC CAUAUUAGU UUAAUUGG AUUUU     U
UC          C         A        A     CAAGU
Stem-loop sequence GUGAGGGAAGAGUAUAAUCAAAAUUAACCCUAAAAAUAAUGUUGAACUUUUAAGGUUAAUUAUGAUUAUACCCUUCUCUCACCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU943152.1
ncRNA:24   UCCACUCUCUUCCCAUAUUAGUAU   1
  ||***|||||=|||||||||||||
targets:867   AGACUAGAGAGGGGUAUAAUCAUA   890

1.0 Zea mays clone 1571293 mRNA sequence NA coding protein psRNATarget